| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os06g46500.1 |
| Family | AA1 |
| Protein Properties | Length: 543 Molecular Weight: 60321.1 Isoelectric Point: 8.9304 |
| Chromosome | Chromosome/Scaffold: 6 Start: 28234421 End: 28238461 |
| Description | SKU5 similar 5 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 46 | 497 | 0 |
| QGILINGQFPGPQIDAVTNDNIIINVFNNLPSPFLLSWQGIQQRRSSWQDGVYGTNCPIPPGGNFTYIMQFKDQIGSYYYFPSLAFHKAAGGYGGIRVLS RPGIPVPFAPPAGDFTILAGDWFKLNHTDLQGILDSGNDLPPPDGLLINGQGWNGNRFTVDQGKTYRFRVSNVGIATSVNIRIQGHSLLLVEVEGSHTVQ STYTSIDVHLGQSYSFLVTADQPPQDYSIIVSTRFTNPVLTTTAVLHYSNSNGALSTVAPPPAPTIQIDWSLNQARSIRWNLTASGPRPNPQGSYHYGLV NTTRTIRLANSRASINGKLRYAVNSVSFIPADTPLKVADFYNIQGVFALGSMPDNPTGGGAYLQTAVMAANMRDYVEVIFENSENFVQSWHIDGYAFWVV GMDGGQWTPASRQSYNLRDAVARYTLQVYPQSWTAIYMPLDNVGMWNIRSES | |||
| Full Sequence |
|---|
| Protein Sequence Length: 543 Download |
| MEATITRFLV FFFLLLVVAV RGDDPYRFYT WNITFGDIYP LGVKQQGILI NGQFPGPQID 60 AVTNDNIIIN VFNNLPSPFL LSWQGIQQRR SSWQDGVYGT NCPIPPGGNF TYIMQFKDQI 120 GSYYYFPSLA FHKAAGGYGG IRVLSRPGIP VPFAPPAGDF TILAGDWFKL NHTDLQGILD 180 SGNDLPPPDG LLINGQGWNG NRFTVDQGKT YRFRVSNVGI ATSVNIRIQG HSLLLVEVEG 240 SHTVQSTYTS IDVHLGQSYS FLVTADQPPQ DYSIIVSTRF TNPVLTTTAV LHYSNSNGAL 300 STVAPPPAPT IQIDWSLNQA RSIRWNLTAS GPRPNPQGSY HYGLVNTTRT IRLANSRASI 360 NGKLRYAVNS VSFIPADTPL KVADFYNIQG VFALGSMPDN PTGGGAYLQT AVMAANMRDY 420 VEVIFENSEN FVQSWHIDGY AFWVVGMDGG QWTPASRQSY NLRDAVARYT LQVYPQSWTA 480 IYMPLDNVGM WNIRSESWAR QYLGQQFYLR VYSPANSWRD ENPIPKNALL CGRASGRRTR 540 PL* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02991 | PLN02991 | 0 | 22 | 542 | 522 | + oxidoreductase | ||
| PLN02792 | PLN02792 | 0 | 21 | 539 | 522 | + oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 21 | 539 | 520 | + oxidoreductase | ||
| PLN02354 | PLN02354 | 0 | 21 | 536 | 524 | + copper ion binding / oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 25 | 535 | 523 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005488 | binding |
| GO:0005507 | copper ion binding |
| GO:0005575 | cellular_component |
| GO:0005618 | cell wall |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ02087.1 | 0 | 1 | 542 | 1 | 542 | hypothetical protein OsI_24168 [Oryza sativa Indica Group] |
| GenBank | EAZ38022.1 | 0 | 22 | 542 | 12 | 532 | hypothetical protein OsJ_22366 [Oryza sativa Japonica Group] |
| RefSeq | NP_001058365.1 | 0 | 1 | 542 | 1 | 542 | Os06g0678800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001147597.1 | 0 | 20 | 542 | 27 | 548 | LOC100281206 [Zea mays] |
| RefSeq | XP_002438855.1 | 0 | 20 | 542 | 25 | 546 | hypothetical protein SORBIDRAFT_10g027270 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 27 | 532 | 4 | 539 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1asq_A | 0 | 27 | 532 | 4 | 539 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1asp_B | 0 | 27 | 532 | 4 | 539 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1asp_A | 0 | 27 | 532 | 4 | 539 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1aso_B | 0 | 27 | 532 | 4 | 539 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
