| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os06g46940.1 |
| Family | GH1 |
| Protein Properties | Length: 227 Molecular Weight: 25711.7 Isoelectric Point: 4.3207 |
| Chromosome | Chromosome/Scaffold: 6 Start: 28475573 End: 28481088 |
| Description | beta glucosidase 41 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH1 | 1 | 217 | 0 |
| MNDIGMDAYRFSISWSRIFPNGTGEPNEEGLSYYNSLIDALLDKGIEPYVTLFHWDLPQALEDRYGGWLNSEIIEDFVQYAFTCFKEFGDRVKHWITFNE PYNFAIDGYDLGIQAPGRCSILSHVFCREGKSSTEPYIVAHNILLAHAGAFRAYEQHFKNEQGGLIGIALNSRWYEPFSNADEDTEAAARAMDFELGWFL DPLMFGHYPPSMQKLAE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 227 Download |
| MNDIGMDAYR FSISWSRIFP NGTGEPNEEG LSYYNSLIDA LLDKGIEPYV TLFHWDLPQA 60 LEDRYGGWLN SEIIEDFVQY AFTCFKEFGD RVKHWITFNE PYNFAIDGYD LGIQAPGRCS 120 ILSHVFCREG KSSTEPYIVA HNILLAHAGA FRAYEQHFKN EQGGLIGIAL NSRWYEPFSN 180 ADEDTEAAAR AMDFELGWFL DPLMFGHYPP SMQKLAETID CGSGNL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02814 | PLN02814 | 2.0e-75 | 1 | 214 | 214 | + beta-glucosidase | ||
| PLN02998 | PLN02998 | 3.0e-77 | 1 | 213 | 213 | + beta-glucosidase | ||
| TIGR03356 | BGL | 4.0e-81 | 1 | 216 | 216 | + beta-galactosidase. | ||
| PLN02849 | PLN02849 | 9.0e-82 | 1 | 214 | 214 | + beta-glucosidase | ||
| pfam00232 | Glyco_hydro_1 | 4.0e-92 | 1 | 219 | 220 | + Glycosyl hydrolase family 1. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005618 | cell wall |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAG90993.1 | 0 | 1 | 226 | 1 | 226 | unnamed protein product [Oryza sativa Japonica Group] |
| RefSeq | NP_001058388.1 | 0 | 1 | 226 | 89 | 314 | Os06g0683300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001146333.1 | 0 | 6 | 216 | 1 | 211 | hypothetical protein LOC100279909 [Zea mays] |
| Swiss-Prot | Q0DA21 | 0 | 1 | 216 | 87 | 302 | BGL25_ORYSJ RecName: Full=Beta-glucosidase 25; Short=Os6bglu25; Flags: Precursor |
| RefSeq | XP_002437464.1 | 0 | 1 | 216 | 87 | 302 | hypothetical protein SORBIDRAFT_10g027600 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3gnr_A | 0 | 1 | 213 | 79 | 291 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 3gnp_A | 0 | 1 | 213 | 79 | 291 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 3gno_A | 0 | 1 | 213 | 79 | 291 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 3ptq_B | 0 | 1 | 216 | 97 | 314 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 3ptq_A | 0 | 1 | 216 | 97 | 314 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| GO843301 | 216 | 1 | 216 | 0 |
| GO860933 | 215 | 1 | 215 | 0 |
| DY960855 | 217 | 1 | 217 | 0 |
| JG877561 | 186 | 1 | 186 | 0 |
| DR804220 | 183 | 1 | 183 | 0 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Arabidopsis lyrata | 918586 | ||||
| Carica papaya | evm.model.supercontig_80.123 | ||||
| Manihot esculenta | cassava4.1_023739m | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |