| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os07g07340.1 |
| Family | CBM43 |
| Protein Properties | Length: 480 Molecular Weight: 51314.7 Isoelectric Point: 5.0897 |
| Chromosome | Chromosome/Scaffold: 7 Start: 3668836 End: 3672256 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 365 | 446 | 2.5e-25 |
| WCVINTNAKDVSKLGDNINFACTYADCTPLGFGSSCNGMDTNGNASYAFNAYFQAQSQKEEACNFQGLAVPTETDPTTAQCN | |||
| GH17 | 25 | 342 | 0 |
| LGINWGTQATHPLPPKAVVQLLKDNGIAKVKLFDTDFAAMSALAGSGVEVMVAIPNKDLATMASDYGNAKDWVKKNVKRFDFDGGVTIKYVAVGNEPFLK AYNGSFINITLPALQNVQNALNDAGIGDRIKATVPLNADVYESTVPSAGRFRPEIAGLMTDIVKFLAKNNAPFTVNIYPFLSLYLDEHFPINFAFFDGGS TPVNDGGIMYTNVFDANFDTLVAALKAVGHGDMPIIVGEVGWPTDGDKNARVDLAQRFYAGLLKRLAANVGTPARPNQYIEMYLFGLVDEDMKSVAPGSF ERHWGVLRYDGQPKFAMD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 480 Download |
| MARLVVVIVA VAMAAWWAVA AVEGLGINWG TQATHPLPPK AVVQLLKDNG IAKVKLFDTD 60 FAAMSALAGS GVEVMVAIPN KDLATMASDY GNAKDWVKKN VKRFDFDGGV TIKYVAVGNE 120 PFLKAYNGSF INITLPALQN VQNALNDAGI GDRIKATVPL NADVYESTVP SAGRFRPEIA 180 GLMTDIVKFL AKNNAPFTVN IYPFLSLYLD EHFPINFAFF DGGSTPVNDG GIMYTNVFDA 240 NFDTLVAALK AVGHGDMPII VGEVGWPTDG DKNARVDLAQ RFYAGLLKRL AANVGTPARP 300 NQYIEMYLFG LVDEDMKSVA PGSFERHWGV LRYDGQPKFA MDLAGQGRNT MLVPAKGIEY 360 LPKTWCVINT NAKDVSKLGD NINFACTYAD CTPLGFGSSC NGMDTNGNAS YAFNAYFQAQ 420 SQKEEACNFQ GLAVPTETDP TTAQCNFTIQ IKSSAAAAAA APVAAGVVVA ALAQLLLLW* 480 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 5.0e-5 | 249 | 334 | 90 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 1.0e-17 | 364 | 434 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 5.0e-32 | 364 | 447 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-76 | 25 | 342 | 320 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005886 | plasma membrane |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG29689.1 | 0 | 25 | 460 | 21 | 461 | glucan endo-1,3-beta-glucosidase 5 precursor [Zea mays] |
| DDBJ | BAF20898.2 | 0 | 28 | 452 | 107 | 531 | Os07g0168600 [Oryza sativa Japonica Group] |
| RefSeq | NP_001058984.1 | 0 | 28 | 452 | 28 | 452 | Os07g0168600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001130924.1 | 0 | 25 | 460 | 22 | 462 | hypothetical protein LOC100192029 [Zea mays] |
| RefSeq | XP_002459388.1 | 0 | 18 | 460 | 22 | 468 | hypothetical protein SORBIDRAFT_02g003910 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 25 | 344 | 2 | 316 | A Chain A, Hevamine Mutant D125aE127A IN COMPLEX WITH TETRA-Nag |
| PDB | 3f55_C | 0 | 25 | 344 | 2 | 316 | A Chain A, Hevamine Mutant D125aE127A IN COMPLEX WITH TETRA-Nag |
| PDB | 3f55_B | 0 | 25 | 344 | 2 | 316 | A Chain A, Hevamine Mutant D125aE127A IN COMPLEX WITH TETRA-Nag |
| PDB | 3f55_A | 0 | 25 | 344 | 2 | 316 | A Chain A, Hevamine Mutant D125aE127A IN COMPLEX WITH TETRA-Nag |
| PDB | 3em5_D | 0 | 25 | 344 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
