| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os07g08950.1 |
| Family | AA4 |
| Protein Properties | Length: 560 Molecular Weight: 61096.9 Isoelectric Point: 7.3364 |
| Chromosome | Chromosome/Scaffold: 7 Start: 4652793 End: 4660423 |
| Description | FAD-linked oxidases family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA4 | 102 | 273 | 1.8e-21 |
| SYFKSILGDSGVVQDEDRVSVANMDWMGKYKGSSQLLLLPKSTAEVSKILSYCNSRRLAVVPQGGNTGLVGGSVPVYDEVIISLGGMDKIITFDNVNGIL TCEAGCVLENLSSYVENKGFIMPLDLGAKGSCHIGGNISTNAGGLRFIRYGSLHGSVLGLEVVLADGTVLDM | |||
| Full Sequence |
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| Protein Sequence Length: 560 Download |
| MARRAAAGLL RRHLGPLAAG ETLQARGMYP KQYGAANHAF SRFYSIQGQQ RSLYGFRTNV 60 ETDDTQQSAR MNFEVQKRSF SSAAAHVQRN PAYSVLNSDD VSYFKSILGD SGVVQDEDRV 120 SVANMDWMGK YKGSSQLLLL PKSTAEVSKI LSYCNSRRLA VVPQGGNTGL VGGSVPVYDE 180 VIISLGGMDK IITFDNVNGI LTCEAGCVLE NLSSYVENKG FIMPLDLGAK GSCHIGGNIS 240 TNAGGLRFIR YGSLHGSVLG LEVVLADGTV LDMLTTLRKD NTGYDLKHLF IGSEGSLGIV 300 TKIAILTPAK LPSTNVAFLS CNDYISCQKL LLAARRSLGE ILSAFEFMDR HCINLAMKYL 360 EGVHNPLPVS PFNFYVLIET TGSDESYDKA KLEAFLLRSM EDGLVADGVI AQDISQASNF 420 WRIREGISEA SVKVGAVYKY DLSIPVEKLY DIVEEMRSRV GDMGQVLGYG HLGDGNLHLN 480 ILSTKYSDKM LAQIEPFVYE WTSKQRGSIS AEHGLGLMKA EKIHYSKSSE AVQLMASIKK 540 LLDPNSILNP YKVLPQSVL* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK11230 | PRK11230 | 2.0e-37 | 126 | 555 | 447 | + glycolate oxidase subunit GlcD; Provisional | ||
| PLN02805 | PLN02805 | 6.0e-42 | 101 | 558 | 483 | + D-lactate dehydrogenase [cytochrome] | ||
| pfam02913 | FAD-oxidase_C | 1.0e-58 | 310 | 553 | 252 | + FAD linked oxidases, C-terminal domain. This domain has a ferredoxin-like fold. | ||
| TIGR00387 | glcD | 3.0e-80 | 139 | 552 | 425 | + glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity [Energy metabolism, Other]. | ||
| COG0277 | GlcD | 5.0e-108 | 103 | 555 | 464 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003674 | molecular_function |
| GO:0003824 | catalytic activity |
| GO:0005739 | mitochondrion |
| GO:0008150 | biological_process |
| GO:0008152 | metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC79943.1 | 0 | 1 | 559 | 1 | 559 | putative actin interacting protein [Oryza sativa Japonica Group] |
| GenBank | EEC81643.1 | 0 | 1 | 559 | 1 | 559 | hypothetical protein OsI_25178 [Oryza sativa Indica Group] |
| GenBank | EEE66707.1 | 0 | 1 | 559 | 1 | 578 | hypothetical protein OsJ_23376 [Oryza sativa Japonica Group] |
| RefSeq | NP_001141496.1 | 0 | 15 | 559 | 14 | 562 | hypothetical protein LOC100273608 [Zea mays] |
| RefSeq | XP_002268002.1 | 0 | 29 | 558 | 15 | 548 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3pm9_F | 0 | 96 | 554 | 13 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_E | 0 | 96 | 554 | 13 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_D | 0 | 96 | 554 | 13 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_C | 0 | 96 | 554 | 13 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_B | 0 | 96 | 554 | 13 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GO838775 | 330 | 141 | 470 | 0 |
| GO839525 | 330 | 129 | 458 | 0 |
| CB662072 | 286 | 104 | 389 | 0 |
| CB662073 | 277 | 284 | 560 | 0 |
| CB673141 | 266 | 31 | 296 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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