| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os07g09050.1 |
| Family | GT47 |
| Protein Properties | Length: 607 Molecular Weight: 65830.7 Isoelectric Point: 8.6027 |
| Chromosome | Chromosome/Scaffold: 7 Start: 4729466 End: 4733531 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 269 | 553 | 0 |
| EKVFKVFVYEEGEPPVFHDGPCRSIYSTEGRFIYAMEMENRMRTRDPDQAHVFFLPFSVVKMVKMIYEPNSHDMDPLRRTISDYINVVSTKYPHWNRSLG ADHFMLSCHDWGPYVSSANGHLFSNSIRVLCNANTSEGFDPSRDVSLPEINLRSDVVDRQVGGPSASHRPILAFFAGGDHGPVRPLLLQHWGKGQDADIQ VSEYLPRRHGMSYTDMMRRSRFCLCPSGYEVASPRVVEAIYLECVPVVIGDDYTLPFADVLNWAAFSVRVAVGDIPRLKEILAAV | |||
| Full Sequence |
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| Protein Sequence Length: 607 Download |
| MRASSFSSLM LPCSHGHGGG RATASTCAAA AAACLALVAL VILVVSMDPR AQASSWFFLS 60 SSSSSSSSSS STLVRPAASS HAASLRKPSS WGGGNGGGGG GEHLLVTSSS FGSGGGARGS 120 WSRNSTSKEV LFQGGGGGGG DEMTSTAAAP TPALIIGSSS GDGVSPSRVA VTAAAAEPTP 180 ALAPAPAPEW GVGDAASGDD IIQVMPQAQR RRDVKLELLE LGLAKARATI REAIQNKDNK 240 PPLTDKDYVP VGPVYRNAYA FHRSYLEMEK VFKVFVYEEG EPPVFHDGPC RSIYSTEGRF 300 IYAMEMENRM RTRDPDQAHV FFLPFSVVKM VKMIYEPNSH DMDPLRRTIS DYINVVSTKY 360 PHWNRSLGAD HFMLSCHDWG PYVSSANGHL FSNSIRVLCN ANTSEGFDPS RDVSLPEINL 420 RSDVVDRQVG GPSASHRPIL AFFAGGDHGP VRPLLLQHWG KGQDADIQVS EYLPRRHGMS 480 YTDMMRRSRF CLCPSGYEVA SPRVVEAIYL ECVPVVIGDD YTLPFADVLN WAAFSVRVAV 540 GDIPRLKEIL AAVSPRQYIR MQRRVRAVRR HFMVSDGAPR RFDVFHMILH SIWLRRLNVR 600 VIARED* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 9.0e-65 | 268 | 553 | 303 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB08605.1 | 0 | 209 | 601 | 21 | 405 | unnamed protein product [Arabidopsis thaliana] |
| DDBJ | BAC83915.1 | 0 | 1 | 379 | 1 | 379 | limonene cyclase like protein [Oryza sativa Japonica Group] |
| GenBank | EAZ03045.1 | 0 | 1 | 606 | 1 | 601 | hypothetical protein OsI_25187 [Oryza sativa Indica Group] |
| RefSeq | NP_001059081.1 | 0 | 1 | 606 | 1 | 606 | Os07g0188700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002459470.1 | 0 | 48 | 603 | 48 | 580 | hypothetical protein SORBIDRAFT_02g005180 [Sorghum bicolor] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FE523338 | 290 | 248 | 537 | 0 |
| GW864815 | 308 | 284 | 591 | 0 |
| GW895167 | 320 | 227 | 544 | 0 |
| CF437544 | 256 | 270 | 525 | 0 |
| EH772765 | 284 | 270 | 551 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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