| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os07g22930.2 |
| Family | GT5 |
| Protein Properties | Length: 609 Molecular Weight: 67354.8 Isoelectric Point: 6.6888 |
| Chromosome | Chromosome/Scaffold: 7 Start: 12916277 End: 12924325 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 83 | 580 | 0 |
| IIFIATECHPWCKTGGLGDVLGGLPPALAAMGHRVMTIVPRYDQYKDAWDTNVLVEVNIGDRTETVRFFHCYKRGVDRVFVDHPMFLEKVWGKTGPKLYG PTTGDDYRDNQLRFCLLCLAALEAPRVLNLNNSEYFSGPYGENVVFVANDWHTGVLPCYLKSIYQAKGMYVNAKVAFCIHNIAYQGRFAREDFELLNLPD SFLPSFDFIDGHFKPVVGRKINWMKAGITECDLVMTVSPHYVKELASGPDKGVELDGILRTKPLETGIVNGMDVYEWNPATDQYISVKYDATTVTEARAL NKEMLQAEVGLPVDSSIPLIVFVGRLEEQKGSDILIAAIPEFVEGNVQIIVLGTGKKKMEEELILLEVKYPNNARGIAKFNVPLAHMMFAGADFIIVPSR FEPCGLIQLQGMRYGVVPICSSTGGLVDTVKEGVTGFHMGLFNVECETVDPVDVTAVASTVKRALKQYNTPAFQEMVQNCMAQDLSWKGPAKKWEEVL | |||
| Full Sequence |
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| Protein Sequence Length: 609 Download |
| MARTMGSTPT YCSYQTNGVG ALKQSPHMQF QQSYNYGVRF LKRDTLSVRI NKHMAKRIAT 60 STGICTKPRR SHMPIVCSAG MTIIFIATEC HPWCKTGGLG DVLGGLPPAL AAMGHRVMTI 120 VPRYDQYKDA WDTNVLVEVN IGDRTETVRF FHCYKRGVDR VFVDHPMFLE KVWGKTGPKL 180 YGPTTGDDYR DNQLRFCLLC LAALEAPRVL NLNNSEYFSG PYGENVVFVA NDWHTGVLPC 240 YLKSIYQAKG MYVNAKVAFC IHNIAYQGRF AREDFELLNL PDSFLPSFDF IDGHFKPVVG 300 RKINWMKAGI TECDLVMTVS PHYVKELASG PDKGVELDGI LRTKPLETGI VNGMDVYEWN 360 PATDQYISVK YDATTVTEAR ALNKEMLQAE VGLPVDSSIP LIVFVGRLEE QKGSDILIAA 420 IPEFVEGNVQ IIVLGTGKKK MEEELILLEV KYPNNARGIA KFNVPLAHMM FAGADFIIVP 480 SRFEPCGLIQ LQGMRYGVVP ICSSTGGLVD TVKEGVTGFH MGLFNVECET VDPVDVTAVA 540 STVKRALKQY NTPAFQEMVQ NCMAQDLSWK GPAKKWEEVL LGLGVEGSQP GIEGEELAPL 600 AKENVATP* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 8.0e-78 | 81 | 578 | 521 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 4.0e-103 | 81 | 578 | 517 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 2.0e-128 | 81 | 579 | 517 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 9.0e-161 | 83 | 580 | 511 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 7.0e-174 | 81 | 583 | 510 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0009058 | biosynthetic process |
| GO:0009536 | plastid |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL58572.1 | 0 | 1 | 608 | 1 | 608 | granule binding starch synthase II precursor [Oryza sativa] |
| GenBank | ACY56073.1 | 0 | 1 | 608 | 1 | 608 | granule-bound starch synthase II [Oryza sativa Japonica Group] |
| GenBank | ACY56075.1 | 0 | 1 | 608 | 1 | 608 | granule-bound starch synthase II [Oryza sativa Japonica Group] |
| GenBank | ACY56079.1 | 0 | 1 | 608 | 1 | 608 | granule-bound starch synthase II [Oryza sativa Indica Group] |
| RefSeq | NP_001059450.1 | 0 | 1 | 608 | 1 | 608 | Os07g0412100 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 81 | 608 | 10 | 536 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3vue_A | 0 | 81 | 608 | 10 | 536 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 81 | 579 | 1 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 81 | 586 | 1 | 479 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 81 | 586 | 1 | 479 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| AJ568414 | 583 | 28 | 609 | 0 |
| HO825853 | 519 | 89 | 607 | 0 |
| HO629148 | 569 | 45 | 609 | 0 |
| CX101131 | 347 | 238 | 584 | 0 |
| CX101131 | 70 | 540 | 609 | 0.000002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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