| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os07g33220.1 |
| Family | GH33 |
| Protein Properties | Length: 425 Molecular Weight: 47615 Isoelectric Point: 6.061 |
| Chromosome | Chromosome/Scaffold: 7 Start: 19850984 End: 19854472 |
| Description | BNR/Asp-box repeat family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH33 | 113 | 408 | 6.2e-31 |
| FTFPAGSAPFNSCHASTIVETEKDSFLVAYFGGSKEGAPDVKIWLQRYSDGCWHTPQVADEQDEVPMWNPVLFQLPSHELLLFYKIGQEVQKWSGAMKRS LDGGKTWSAREQLPPGILGPIKNKPFLVEDGRLLCGSSVESWNSWGAWLEVTKDAGRTWRKYGPIYIEGETLGVIQPVPYMTANGTIRVLLRSFETIGRV CMADSADGGVTWSYVHETDLPNPNSGIDGVKMKDGRVLLAYNTFSRGTLKVAVSMDDGDSWNDVMTLEDTEGMEFSYPAVIQTMDDLIHITYTYNR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 425 Download |
| MVTIYWCSRQ KVAWSATGCT LLISLLFFFS GSPHRILLNK KPLNFKTAPS RLLREISISS 60 SRVQRVNNSS AEFVANLNDR NVEIVQHMED NDHNIINATA NVTSDWSIVK EEFTFPAGSA 120 PFNSCHASTI VETEKDSFLV AYFGGSKEGA PDVKIWLQRY SDGCWHTPQV ADEQDEVPMW 180 NPVLFQLPSH ELLLFYKIGQ EVQKWSGAMK RSLDGGKTWS AREQLPPGIL GPIKNKPFLV 240 EDGRLLCGSS VESWNSWGAW LEVTKDAGRT WRKYGPIYIE GETLGVIQPV PYMTANGTIR 300 VLLRSFETIG RVCMADSADG GVTWSYVHET DLPNPNSGID GVKMKDGRVL LAYNTFSRGT 360 LKVAVSMDDG DSWNDVMTLE DTEGMEFSYP AVIQTMDDLI HITYTYNRTQ IKHVVLQPSG 420 KVRW* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00260 | Sialidase | 7.0e-5 | 208 | 373 | 203 | + Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. | ||
| cd00260 | Sialidase | 7.0e-5 | 143 | 376 | 274 | + Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. | ||
| COG4692 | COG4692 | 8.0e-33 | 121 | 418 | 352 | + Predicted neuraminidase (sialidase) [Carbohydrate transport and metabolism] | ||
| pfam13088 | BNR_2 | 8.0e-95 | 136 | 402 | 282 | + BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005575 | cellular_component |
| GO:0008150 | biological_process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC82140.1 | 0 | 1 | 412 | 1 | 412 | hypothetical protein OsI_26191 [Oryza sativa Indica Group] |
| GenBank | EEC82140.1 | 0 | 84 | 419 | 392 | 682 | hypothetical protein OsI_26191 [Oryza sativa Indica Group] |
| GenBank | EEE67268.1 | 0 | 1 | 423 | 501 | 923 | hypothetical protein OsJ_24447 [Oryza sativa Japonica Group] |
| GenBank | EEE67268.1 | 0 | 84 | 419 | 892 | 1182 | hypothetical protein OsJ_24447 [Oryza sativa Japonica Group] |
| RefSeq | NP_001059779.1 | 0 | 1 | 424 | 1 | 424 | Os07g0516000 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jkb_A | 0.003 | 208 | 331 | 449 | 571 | A Chain A, Crystal Structure Of Streptococcus Pneumoniae Nanb In Complex With 2,7-Anhydro-Neu5ac |
| PDB | 4fq4_A | 0.004 | 208 | 331 | 460 | 582 | A Chain A, Crystal Structure Of Streptococcus Pneumoniae Nanb In Complex With 2,7-Anhydro-Neu5ac |
| PDB | 4fpy_A | 0.004 | 208 | 331 | 460 | 582 | A Chain A, Crystal Structure Of Streptococcus Pneumoniae Nanb In Complex With 2,7-Anhydro-Neu5ac |
| PDB | 4fpo_B | 0.004 | 208 | 331 | 460 | 582 | A Chain A, Crystal Structure Of Streptococcus Pneumoniae Nanb In Complex With 2,7-Anhydro-Neu5ac |
| PDB | 4fpl_A | 0.004 | 208 | 331 | 460 | 582 | A Chain A, Crystal Structure Of Streptococcus Pneumoniae Nanb In Complex With 2,7-Anhydro-Neu5ac |
