| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os07g35350.2 |
| Family | CBM43 |
| Protein Properties | Length: 559 Molecular Weight: 59362.7 Isoelectric Point: 4.9933 |
| Chromosome | Chromosome/Scaffold: 7 Start: 21150011 End: 21152329 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 377 | 457 | 6.1e-30 |
| WCVANAAIGNARLQGALDWACSNGADCSAIQQGKVCYEPNTMVAHASYAFNDYYQRNGKASSACNFAGAAYIVYKPSPSIC | |||
| CBM43 | 463 | 544 | 1.5e-31 |
| WCVANAEVGDMRLQAALDYACSSCADCSAIQPGGRCFDPNTKVAHATYAFNDYYQTAGRASGSCDFGGAASIVNQAPRIGNC | |||
| GH17 | 29 | 365 | 0 |
| LGVCYGRDADNLMDPQSVVSLLRANGITMVRIFDADPAVLRALANTGIKVMVALPNTDLGSAGWDPSYAQRWVESSVVPYYPATLINGVAVGNEVFDQAP HLTQQLVPAMRNVHAALARLGLADAIRVSTPITFSSVEVSFPPSAGAFRDDIAQSVMSPMIDFLQQTDSYFMVNLYPFFAYADPSTGISLEYATFRPNAG VFDPVSGVTYYSLFDAELDAVYYAINKVSGSNERASLAQAGGRVPIRVSESGHPSGGRIRSGVTEANADGDSVATKANAQAYNNGLAKRVLFGASNMEDV SAYIFALFNENKKGGPSIESNFGLFYPDGTKVYDVDF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 559 Download |
| MALTHHLLRV LLATALPLLF LSHADAGELG VCYGRDADNL MDPQSVVSLL RANGITMVRI 60 FDADPAVLRA LANTGIKVMV ALPNTDLGSA GWDPSYAQRW VESSVVPYYP ATLINGVAVG 120 NEVFDQAPHL TQQLVPAMRN VHAALARLGL ADAIRVSTPI TFSSVEVSFP PSAGAFRDDI 180 AQSVMSPMID FLQQTDSYFM VNLYPFFAYA DPSTGISLEY ATFRPNAGVF DPVSGVTYYS 240 LFDAELDAVY YAINKVSGSN ERASLAQAGG RVPIRVSESG HPSGGRIRSG VTEANADGDS 300 VATKANAQAY NNGLAKRVLF GASNMEDVSA YIFALFNENK KGGPSIESNF GLFYPDGTKV 360 YDVDFHGGGT CPTKESWCVA NAAIGNARLQ GALDWACSNG ADCSAIQQGK VCYEPNTMVA 420 HASYAFNDYY QRNGKASSAC NFAGAAYIVY KPSPSICDPN PSWCVANAEV GDMRLQAALD 480 YACSSCADCS AIQPGGRCFD PNTKVAHATY AFNDYYQTAG RASGSCDFGG AASIVNQAPR 540 IGNCVLPPSK TSSMNIFY* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 2.0e-21 | 376 | 447 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| pfam07983 | X8 | 5.0e-22 | 462 | 533 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 3.0e-35 | 376 | 457 | 83 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| smart00768 | X8 | 1.0e-36 | 462 | 545 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-92 | 29 | 365 | 339 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005623 | cell |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ04201.1 | 0 | 21 | 548 | 21 | 553 | hypothetical protein OsI_26344 [Oryza sativa Indica Group] |
| GenBank | EAZ40149.1 | 0 | 21 | 548 | 21 | 553 | hypothetical protein OsJ_24593 [Oryza sativa Japonica Group] |
| GenBank | EEC82195.1 | 0 | 1 | 554 | 1 | 554 | hypothetical protein OsI_26335 [Oryza sativa Indica Group] |
| RefSeq | NP_001059878.1 | 0 | 1 | 558 | 1 | 558 | Os07g0538000 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001059886.1 | 0 | 8 | 548 | 27 | 575 | Os07g0539400 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 28 | 365 | 1 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 3f55_C | 0 | 28 | 365 | 1 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 3f55_B | 0 | 28 | 365 | 1 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 3f55_A | 0 | 28 | 365 | 1 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 3em5_D | 0 | 28 | 365 | 1 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
