| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os07g35480.2 |
| Family | CBM43 |
| Protein Properties | Length: 554 Molecular Weight: 58545.2 Isoelectric Point: 4.7859 |
| Chromosome | Chromosome/Scaffold: 7 Start: 21223250 End: 21225811 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 379 | 459 | 1.3e-31 |
| WCVANPNVDNAALQRALDWACNNGADCSAIQLGKACYEPNTLVAHASYAFNDYYQRKGQASGTCNFNGVAFIVYKPSPSIC | |||
| CBM43 | 465 | 546 | 7.5e-32 |
| WCVAKDSVGEAQLQNALDYACGSCADCSAIQRGAQCFNPDTKVAHATYAFNDYYQTAGRASGSCDFAGAATIVTQQPKIGNC | |||
| GH17 | 29 | 366 | 0 |
| IGVCYGRDASNLIDPPEVVKLLNANSITMVRIYDTDPTVLNALANTGIKVMVMLPNKDLASAGADVGSATNWVKNNVVPYLNQGTLINGVAVGNEVFKQQ PELTGMLVSAMQNVQMALANLNLADGIKVSTPIAFDALDVSFPPSDGRFKDSIAQSVMKPMIDFLVRTGSYLLVNLYPMYAAADPSTHISIEYATFRPNS GVLDEKTGIMYFSLFDAELDAVYAAISKVSGGSLRASLAQGDQMLVQVAETGHSSGNTFGGPVVVEADADLNAIATIPNAKAYNNGLIRRVLSGSPGKHD VSAYIFSLFNENLKPGPATEGHFGLFYPNGQQVYEVNF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 554 Download |
| MAVNHKLSAL LVATALPLLL LSTADAGEIG VCYGRDASNL IDPPEVVKLL NANSITMVRI 60 YDTDPTVLNA LANTGIKVMV MLPNKDLASA GADVGSATNW VKNNVVPYLN QGTLINGVAV 120 GNEVFKQQPE LTGMLVSAMQ NVQMALANLN LADGIKVSTP IAFDALDVSF PPSDGRFKDS 180 IAQSVMKPMI DFLVRTGSYL LVNLYPMYAA ADPSTHISIE YATFRPNSGV LDEKTGIMYF 240 SLFDAELDAV YAAISKVSGG SLRASLAQGD QMLVQVAETG HSSGNTFGGP VVVEADADLN 300 AIATIPNAKA YNNGLIRRVL SGSPGKHDVS AYIFSLFNEN LKPGPATEGH FGLFYPNGQQ 360 VYEVNFQGGR SPCPTNASWC VANPNVDNAA LQRALDWACN NGADCSAIQL GKACYEPNTL 420 VAHASYAFND YYQRKGQASG TCNFNGVAFI VYKPSPSICD PNPSWCVAKD SVGEAQLQNA 480 LDYACGSCAD CSAIQRGAQC FNPDTKVAHA TYAFNDYYQT AGRASGSCDF AGAATIVTQQ 540 PKIGNCLLPP NNA* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 8.0e-23 | 464 | 535 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| pfam07983 | X8 | 3.0e-23 | 378 | 448 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 8.0e-37 | 378 | 459 | 83 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| smart00768 | X8 | 2.0e-37 | 464 | 546 | 83 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 5.0e-89 | 29 | 366 | 340 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC82199.1 | 0 | 1 | 458 | 1 | 444 | hypothetical protein OsI_26341 [Oryza sativa Indica Group] |
| GenBank | EEC82199.1 | 4e-31 | 436 | 553 | 344 | 454 | hypothetical protein OsI_26341 [Oryza sativa Indica Group] |
| GenBank | EEE67335.1 | 0 | 1 | 553 | 1 | 521 | hypothetical protein OsJ_24590 [Oryza sativa Japonica Group] |
| GenBank | EEE67336.1 | 0 | 20 | 553 | 48 | 583 | hypothetical protein OsJ_24592 [Oryza sativa Japonica Group] |
| RefSeq | NP_001059883.1 | 0 | 1 | 553 | 1 | 553 | Os07g0539100 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghs_B | 0 | 29 | 366 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 29 | 366 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 2cyg_A | 0 | 29 | 366 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 28 | 366 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 28 | 366 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
