| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os07g35510.1 |
| Family | CBM43 |
| Protein Properties | Length: 578 Molecular Weight: 60897.6 Isoelectric Point: 4.9316 |
| Chromosome | Chromosome/Scaffold: 7 Start: 21238269 End: 21241263 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 382 | 460 | 1.1e-30 |
| WCVARTDVGSAALQSALDFACGNGADCSAIRQGSVCFEPNTLVAHASYAFNDYYQRKGQASGTCNFSGAASIVFKPSPS | |||
| CBM43 | 468 | 549 | 5.6e-31 |
| WCVAKSEVGDAQLQNALDYACGSCADCSAIQPGARCFDPDTKVAHATYAFNDFYQTTGRASGSCDFAGAASIVNQQPKIGNC | |||
| GH17 | 30 | 367 | 0 |
| IGVCYGRDANNLIDPPAAVSLLKANGISAVRIFDADQTVLDAMANTGIKVMVAIPNADLAAAGQDLRSATDWVTNNVVPYRSRGTLINGVAVGNEVFRQR PELTGMLVSAMRNLHKALENLNLANDVKVSTPIAFDALKQSSPPSAGEFKDEIAQSVMKPMIDFLKQTGSYFMVNLYPYFAYVAQPDKISLEFATFRPNA GVLDGNTGIRYFSLFDAQLDAVYAAINRVSGGSLTVSMARRDGILSVQASESGHPSGGTFPLFSMLAAADTDSIATIADAQAYNNGLIRRVVSGASGMRD VSAYIFSLFNENEKPGPAIERNFGLFYPNGQKVYEVDF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 578 Download |
| MAFSHLLHAL LVAAALPLLL LPRAADAGEI GVCYGRDANN LIDPPAAVSL LKANGISAVR 60 IFDADQTVLD AMANTGIKVM VAIPNADLAA AGQDLRSATD WVTNNVVPYR SRGTLINGVA 120 VGNEVFRQRP ELTGMLVSAM RNLHKALENL NLANDVKVST PIAFDALKQS SPPSAGEFKD 180 EIAQSVMKPM IDFLKQTGSY FMVNLYPYFA YVAQPDKISL EFATFRPNAG VLDGNTGIRY 240 FSLFDAQLDA VYAAINRVSG GSLTVSMARR DGILSVQASE SGHPSGGTFP LFSMLAAADT 300 DSIATIADAQ AYNNGLIRRV VSGASGMRDV SAYIFSLFNE NEKPGPAIER NFGLFYPNGQ 360 KVYEVDFRGG GGGGACPTKT SWCVARTDVG SAALQSALDF ACGNGADCSA IRQGSVCFEP 420 NTLVAHASYA FNDYYQRKGQ ASGTCNFSGA ASIVFKPSPS ICDPNPSWCV AKSEVGDAQL 480 QNALDYACGS CADCSAIQPG ARCFDPDTKV AHATYAFNDF YQTTGRASGS CDFAGAASIV 540 NQQPKIGNCV LPPNNAGTEQ TAIEDQSTAN LPATAWQ* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 2.0e-21 | 467 | 538 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| pfam07983 | X8 | 6.0e-23 | 381 | 452 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 7.0e-36 | 381 | 462 | 83 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| smart00768 | X8 | 2.0e-36 | 467 | 550 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 8.0e-85 | 30 | 367 | 340 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005623 | cell |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC84503.1 | 0 | 1 | 577 | 1 | 577 | putative beta-1,3-glucanase [Oryza sativa Japonica Group] |
| GenBank | EEC82201.1 | 0 | 26 | 577 | 26 | 542 | hypothetical protein OsI_26343 [Oryza sativa Indica Group] |
| GenBank | EEE67336.1 | 0 | 11 | 577 | 28 | 604 | hypothetical protein OsJ_24592 [Oryza sativa Japonica Group] |
| RefSeq | NP_001059883.1 | 0 | 1 | 556 | 1 | 553 | Os07g0539100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001061351.1 | 0 | 26 | 577 | 25 | 577 | Os08g0244500 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 30 | 367 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 29 | 367 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 29 | 367 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_B | 0 | 29 | 367 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_A | 0 | 29 | 367 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
