| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os07g35520.1 |
| Family | CBM43 |
| Protein Properties | Length: 562 Molecular Weight: 60366.3 Isoelectric Point: 5.6385 |
| Chromosome | Chromosome/Scaffold: 7 Start: 21244872 End: 21247832 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 382 | 462 | 2.8e-30 |
| WCVANLAVGNSRLQAALDWACSNGADCSAIQQGKPCFEPNTMVAHASFAFNDYYQRMGQANGTCDFAGAAYIVFQPSESIC | |||
| CBM43 | 468 | 549 | 9.2e-32 |
| WCIANPAVGDMRLQAALDYACGSCADCSAIQPGARCFEPNTKVAHASYAFNDYYQRVGRVSGSCDFGGAGSITYQAPEIGNC | |||
| GH17 | 29 | 370 | 0 |
| VGVCYGRDADDLMDPPAVVNLLKENGITKVRIYDADPTVLRSLSNTGIKVMVALPNKDLASAGHDQGSALDWVKTNIVPYYNQGTQINGVAVGNEVFRQA PNLTPQLLPAMKNVQTALARLGLADIIKVSTPINFDAVNVSWPSSKGVFQDSIAQSVMSPMIDFLQQTNSYLMVNFYPYIAWANSKGQISRDYATFGPNA GVVDPWSHITYYSLFDAQLDAVYYAINQVSGDSVRASMAQTRWGHPTPRVPVKCSECGHPSGGQFRKLTTQADAEVDVATKANAQAFNNGIIRRALFGAS GMPDVSVYIFALFNENKKAGASVERNFGLFYPNGTKVYEVDF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 562 Download |
| MALTHLLCSL LLATALLLLS ISRTEAGEVG VCYGRDADDL MDPPAVVNLL KENGITKVRI 60 YDADPTVLRS LSNTGIKVMV ALPNKDLASA GHDQGSALDW VKTNIVPYYN QGTQINGVAV 120 GNEVFRQAPN LTPQLLPAMK NVQTALARLG LADIIKVSTP INFDAVNVSW PSSKGVFQDS 180 IAQSVMSPMI DFLQQTNSYL MVNFYPYIAW ANSKGQISRD YATFGPNAGV VDPWSHITYY 240 SLFDAQLDAV YYAINQVSGD SVRASMAQTR WGHPTPRVPV KCSECGHPSG GQFRKLTTQA 300 DAEVDVATKA NAQAFNNGII RRALFGASGM PDVSVYIFAL FNENKKAGAS VERNFGLFYP 360 NGTKVYEVDF HGGGICPTKA SWCVANLAVG NSRLQAALDW ACSNGADCSA IQQGKPCFEP 420 NTMVAHASFA FNDYYQRMGQ ANGTCDFAGA AYIVFQPSES ICDPNPSWCI ANPAVGDMRL 480 QAALDYACGS CADCSAIQPG ARCFEPNTKV AHASYAFNDY YQRVGRVSGS CDFGGAGSIT 540 YQAPEIGNCV LPPMLELDKA Y* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 4.0e-21 | 381 | 452 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| pfam07983 | X8 | 4.0e-23 | 467 | 538 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-34 | 381 | 462 | 83 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| smart00768 | X8 | 5.0e-38 | 467 | 550 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-87 | 29 | 370 | 344 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ04201.1 | 0 | 21 | 561 | 21 | 561 | hypothetical protein OsI_26344 [Oryza sativa Indica Group] |
| GenBank | EAZ40149.1 | 0 | 1 | 561 | 1 | 561 | hypothetical protein OsJ_24593 [Oryza sativa Japonica Group] |
| GenBank | EEE67338.1 | 0 | 23 | 553 | 21 | 555 | hypothetical protein OsJ_24595 [Oryza sativa Japonica Group] |
| RefSeq | NP_001059886.1 | 0 | 6 | 561 | 27 | 583 | Os07g0539400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001059888.1 | 0 | 10 | 553 | 46 | 599 | Os07g0539900 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 29 | 370 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 29 | 370 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 29 | 370 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_D | 0 | 28 | 370 | 1 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_C | 0 | 28 | 370 | 1 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
