| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os07g35560.3 |
| Family | CBM43 |
| Protein Properties | Length: 505 Molecular Weight: 53753.2 Isoelectric Point: 5.9507 |
| Chromosome | Chromosome/Scaffold: 7 Start: 21280300 End: 21282626 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 330 | 410 | 2.9e-31 |
| WCVANSAVGSTRLQAALDWACSNGADCGAIQPGKTCFAPNTLVAHASYAFNDYYQRKSQASGTCDFSGAAFIVYKPSPSIC | |||
| CBM43 | 416 | 497 | 7.6e-32 |
| WCIAKPEVGDTRLQNALDYACGSCADCSAIQRGAQCFDPDTKVAHATYAFNDYYQTTGRASGSCDFNGAATIVTQQPKIGNC | |||
| GH17 | 2 | 315 | 0 |
| VRIYDADPTVLNALANQNIKVMVAMSNRDLVAGSAKDFNSALSWVKNYVLPYYRSSQINGVAVGNEVFQQAPDLTSQLVSAMRNVQAALARLGLADAIKV STPISFDSVKVSFPPSAGVFQDNIAQSVMSPMIDFLQQTNSYLMVNFYPYIAWANSNGQISRDYAVFGPNASPVVDQASGITYHSLFDAQLDAVYFAIDH VSGGSVRVSMAQARRGRPSPRIPVKCSECGHPSGGRLPQLSTLDDVQVDVATKANAQAFNNGLISRALFGATGMPDVSVYIFALFNENLKGGASVEQNFG LFYPDGTEVYQVDF | |||
| Full Sequence |
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| Protein Sequence Length: 505 Download |
| MVRIYDADPT VLNALANQNI KVMVAMSNRD LVAGSAKDFN SALSWVKNYV LPYYRSSQIN 60 GVAVGNEVFQ QAPDLTSQLV SAMRNVQAAL ARLGLADAIK VSTPISFDSV KVSFPPSAGV 120 FQDNIAQSVM SPMIDFLQQT NSYLMVNFYP YIAWANSNGQ ISRDYAVFGP NASPVVDQAS 180 GITYHSLFDA QLDAVYFAID HVSGGSVRVS MAQARRGRPS PRIPVKCSEC GHPSGGRLPQ 240 LSTLDDVQVD VATKANAQAF NNGLISRALF GATGMPDVSV YIFALFNENL KGGASVEQNF 300 GLFYPDGTEV YQVDFHNGGG GNVCPTKASW CVANSAVGST RLQAALDWAC SNGADCGAIQ 360 PGKTCFAPNT LVAHASYAFN DYYQRKSQAS GTCDFSGAAF IVYKPSPSIC DPNPSWCIAK 420 PEVGDTRLQN ALDYACGSCA DCSAIQRGAQ CFDPDTKVAH ATYAFNDYYQ TTGRASGSCD 480 FNGAATIVTQ QPKIGNCVLS PNNS* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 3.0e-21 | 415 | 486 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| pfam07983 | X8 | 3.0e-23 | 329 | 399 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-35 | 329 | 410 | 83 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| smart00768 | X8 | 4.0e-36 | 415 | 498 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-76 | 2 | 315 | 316 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC80125.1 | 0 | 1 | 504 | 1 | 504 | putative beta-1,3-glucanase precursor [Oryza sativa Japonica Group] |
| GenBank | EEC82204.1 | 0 | 1 | 504 | 55 | 558 | hypothetical protein OsI_26347 [Oryza sativa Indica Group] |
| GenBank | EEE67338.1 | 0 | 1 | 504 | 55 | 558 | hypothetical protein OsJ_24595 [Oryza sativa Japonica Group] |
| RefSeq | NP_001059886.1 | 0 | 2 | 501 | 80 | 575 | Os07g0539400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001059888.1 | 0 | 1 | 504 | 99 | 602 | Os07g0539900 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghs_B | 0 | 2 | 315 | 30 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 2 | 315 | 30 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 2cyg_A | 0 | 2 | 315 | 30 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 9.80909e-45 | 2 | 315 | 31 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 9.80909e-45 | 2 | 315 | 31 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CB619603 | 269 | 193 | 461 | 0 |
| CB665361 | 246 | 3 | 248 | 0 |
| CB622764 | 232 | 1 | 232 | 0 |
| CB619647 | 221 | 201 | 421 | 0 |
| CB619603 | 81 | 408 | 488 | 1e-22 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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