| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os07g37960.1 |
| Family | GT47 |
| Protein Properties | Length: 454 Molecular Weight: 50546.8 Isoelectric Point: 8.7746 |
| Chromosome | Chromosome/Scaffold: 7 Start: 22780108 End: 22783758 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 56 | 378 | 0 |
| PVKIYMYDLPAKFTYGVVRSYMAARARAGAAGAASAIPDDELRYPGHQHSAEWWLFKDLRRRGPLDRPVARVDDPADADLFYVPFFSSLSLVVNPIRPSA AAANASDAAEPAYSDESTQEELLVWLERQPYWRRHQGRDHVFICQDPNALYRVVDRISNAVLLISDFGRLRSEQASLVKDVILPYAHRINSFQGDVGVES RPSLLFFMGNRYRKEGGKVRDTLFQVLENEADVIIKHGAQSRESRRMATRGMHSSKFCLHPAGDTPSACRLFDALVSLCVPVIVSDYIELPFEDVIDYRN ISIFVETSKAVQPGFLTSTLRGI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 454 Download |
| MPSRRPSPLL LLLLALALAF LFLLLSPSAP SASHLSSSLA SAAAAVSTPA SSPPAPVKIY 60 MYDLPAKFTY GVVRSYMAAR ARAGAAGAAS AIPDDELRYP GHQHSAEWWL FKDLRRRGPL 120 DRPVARVDDP ADADLFYVPF FSSLSLVVNP IRPSAAAANA SDAAEPAYSD ESTQEELLVW 180 LERQPYWRRH QGRDHVFICQ DPNALYRVVD RISNAVLLIS DFGRLRSEQA SLVKDVILPY 240 AHRINSFQGD VGVESRPSLL FFMGNRYRKE GGKVRDTLFQ VLENEADVII KHGAQSRESR 300 RMATRGMHSS KFCLHPAGDT PSACRLFDAL VSLCVPVIVS DYIELPFEDV IDYRNISIFV 360 ETSKAVQPGF LTSTLRGISS QRILEYQREI KKVKHYFEYE DPNGPVNQIW HQVSSKAPLI 420 KLLINRDKRL VERGTNGTDC SCICSTTKEL LRK* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 1.0e-61 | 57 | 378 | 333 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005623 | cell |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC55656.1 | 0 | 53 | 453 | 53 | 453 | exostosin family protein-like protein [Oryza sativa Japonica Group] |
| GenBank | EEC82282.1 | 0 | 61 | 453 | 1 | 393 | hypothetical protein OsI_26516 [Oryza sativa Indica Group] |
| GenBank | EEE67431.1 | 0 | 53 | 453 | 100 | 500 | hypothetical protein OsJ_24780 [Oryza sativa Japonica Group] |
| RefSeq | NP_001060019.1 | 0 | 53 | 453 | 100 | 500 | Os07g0567000 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002460871.1 | 0 | 1 | 447 | 45 | 492 | hypothetical protein SORBIDRAFT_02g036640 [Sorghum bicolor] |
