| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os07g38930.3 |
| Family | CBM43 |
| Protein Properties | Length: 499 Molecular Weight: 53585.5 Isoelectric Point: 5.6927 |
| Chromosome | Chromosome/Scaffold: 7 Start: 23344858 End: 23348858 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 370 | 451 | 3.8e-29 |
| CVANSSAPHSALKQSLDWACGPGSANCSAIQPGQPCYKSDDIVAVASYAFNDYYHRTRASGGTCNFNSTAMVTSTDPSHGSC | |||
| GH17 | 31 | 352 | 0 |
| VGINVGTDISNPPSASDTVSILKEKKIQHVRLLDSDHQMLSALANTGIEVVVGVPNDQLLRVGQSRSTAADWINKNVAAYIPATNITHIAVGNEVLTTEP NAALVLVPALQFLQSALLAANLNTQVKISSPHSTDMISKPFPPSTATFNSTWSSIMLQYLQFLNNTASPFMLNAQPYYDYVKGQGVFPLEYALFRSLNPD SQISDPNTNLFYTNMFDAMVDATYNSMQAMNFTGIPVMVTASGWPSHGGQNEKAANVDNALAYNTNLIRHVLNNSGTPGQPNNQVSTFIFELFNEDLRAG PVSEKNWGIMFPNATTVYSLTF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 499 Download |
| MLEHRNMWPA SLKGVVILLM LMVFNVSGAF VGINVGTDIS NPPSASDTVS ILKEKKIQHV 60 RLLDSDHQML SALANTGIEV VVGVPNDQLL RVGQSRSTAA DWINKNVAAY IPATNITHIA 120 VGNEVLTTEP NAALVLVPAL QFLQSALLAA NLNTQVKISS PHSTDMISKP FPPSTATFNS 180 TWSSIMLQYL QFLNNTASPF MLNAQPYYDY VKGQGVFPLE YALFRSLNPD SQISDPNTNL 240 FYTNMFDAMV DATYNSMQAM NFTGIPVMVT ASGWPSHGGQ NEKAANVDNA LAYNTNLIRH 300 VLNNSGTPGQ PNNQVSTFIF ELFNEDLRAG PVSEKNWGIM FPNATTVYSL TFEDMATTNT 360 DSPVLRGTFC VANSSAPHSA LKQSLDWACG PGSANCSAIQ PGQPCYKSDD IVAVASYAFN 420 DYYHRTRASG GTCNFNSTAM VTSTDPSHGS CIFAGSTGSN GSNGGAASGP VSPDNFATQI 480 HSCWLTHLIT LLSIMVFM* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 2.0e-5 | 263 | 340 | 81 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 1.0e-16 | 368 | 440 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-36 | 368 | 453 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 7.0e-76 | 31 | 352 | 322 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005886 | plasma membrane |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC83070.1 | 0 | 7 | 447 | 1 | 441 | putative elicitor inducible beta-1,3-glucanase [Oryza sativa Japonica Group] |
| DDBJ | BAH01358.1 | 0 | 1 | 498 | 1 | 498 | unnamed protein product [Oryza sativa Japonica Group] |
| GenBank | EEC82319.1 | 0 | 25 | 498 | 48 | 521 | hypothetical protein OsI_26597 [Oryza sativa Indica Group] |
| GenBank | EEE67465.1 | 0 | 25 | 498 | 82 | 555 | hypothetical protein OsJ_24859 [Oryza sativa Japonica Group] |
| RefSeq | NP_001060087.1 | 0 | 24 | 498 | 167 | 641 | Os07g0577300 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 31 | 352 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 31 | 352 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 31 | 352 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_D | 0 | 31 | 352 | 2 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_C | 0 | 31 | 352 | 2 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
