| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os07g47120.1 |
| Family | GH14 |
| Protein Properties | Length: 524 Molecular Weight: 56761.4 Isoelectric Point: 6.1689 |
| Chromosome | Chromosome/Scaffold: 7 Start: 28178236 End: 28181579 |
| Description | beta-amylase 3 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 78 | 490 | 0 |
| FVGLPIDTVTDGATVNSARGVTSGMRAVKLLGADGVELPVFWSVAQPESPDRFSWAGYRAVADMARDEGLSLRVTLHFHGSPGGAVPLLPVWVSTAAADD PDILFTDRSGGRHDDCLSFAVDELPVIHGRSPLDCYDAFFRSFADAFQDLFDSTITDVTVGLGPNGELRYPSYPPGSDGQGFTGVGEFQCYDRYMLEQLR RHAAEAGEPLWGLSGPHDAPRYGDSPDACGFFNDHGGSWQSAYGDFFLSWYAGQLVGHGDRVLAVANGALGDTPVEASAKVPFMHWWHGARSRPAEAVAG FYKSGGKNGYSPVAKMFARRGCTVIVPGMDVCMNKQHRITGSSPDQLLVQIKNACRRHGARIAGENASLVVTHTSSFSRIRSNVLTAERMRPGHFTYQRM GEAFFSPEHWPAF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 524 Download |
| MCAMSSVLAT HHHAARCGAV RRENAWIAPA RVGFSQARRG GGRDELSAAG LGRFLGYATA 60 DHKNKNHEVD DLEPARLFVG LPIDTVTDGA TVNSARGVTS GMRAVKLLGA DGVELPVFWS 120 VAQPESPDRF SWAGYRAVAD MARDEGLSLR VTLHFHGSPG GAVPLLPVWV STAAADDPDI 180 LFTDRSGGRH DDCLSFAVDE LPVIHGRSPL DCYDAFFRSF ADAFQDLFDS TITDVTVGLG 240 PNGELRYPSY PPGSDGQGFT GVGEFQCYDR YMLEQLRRHA AEAGEPLWGL SGPHDAPRYG 300 DSPDACGFFN DHGGSWQSAY GDFFLSWYAG QLVGHGDRVL AVANGALGDT PVEASAKVPF 360 MHWWHGARSR PAEAVAGFYK SGGKNGYSPV AKMFARRGCT VIVPGMDVCM NKQHRITGSS 420 PDQLLVQIKN ACRRHGARIA GENASLVVTH TSSFSRIRSN VLTAERMRPG HFTYQRMGEA 480 FFSPEHWPAF VEFVRGVVCG EWPDEDEDRD VADNPNAMEA QPV* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 8.0e-79 | 77 | 495 | 430 | + beta-amylase | ||
| PLN02161 | PLN02161 | 1.0e-89 | 77 | 495 | 437 | + beta-amylase | ||
| PLN02801 | PLN02801 | 7.0e-92 | 77 | 495 | 431 | + beta-amylase | ||
| PLN00197 | PLN00197 | 2.0e-101 | 77 | 504 | 436 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 3.0e-112 | 77 | 495 | 428 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0003824 | catalytic activity |
| GO:0005488 | binding |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN35504.1 | 0 | 7 | 523 | 6 | 531 | unknown [Zea mays] |
| GenBank | EAZ05063.1 | 0 | 1 | 523 | 1 | 523 | hypothetical protein OsI_27252 [Oryza sativa Indica Group] |
| GenBank | EAZ41009.1 | 0 | 272 | 523 | 1 | 252 | hypothetical protein OsJ_25494 [Oryza sativa Japonica Group] |
| RefSeq | NP_001060573.1 | 0 | 1 | 523 | 1 | 523 | Os07g0667100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002463351.1 | 0 | 4 | 510 | 8 | 513 | hypothetical protein SORBIDRAFT_02g042220 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1q6g_A | 0 | 77 | 494 | 14 | 438 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
| PDB | 1q6d_A | 0 | 77 | 494 | 14 | 438 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| PDB | 1wdr_A | 0 | 77 | 494 | 14 | 438 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1wdp_A | 0 | 77 | 494 | 14 | 438 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1q6c_A | 0 | 77 | 494 | 14 | 438 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO781436 | 394 | 123 | 508 | 0 |
| HO796964 | 379 | 138 | 508 | 0 |
| HO853900 | 361 | 149 | 506 | 0 |
| FL869001 | 288 | 178 | 464 | 0 |
| HO781436 | 57 | 75 | 130 | 0.0000004 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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