| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os07g47830.1 |
| Family | CE8 |
| Protein Properties | Length: 580 Molecular Weight: 63058 Isoelectric Point: 8.448 |
| Chromosome | Chromosome/Scaffold: 7 Start: 28558620 End: 28562961 |
| Description | pectin methylesterase 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 267 | 563 | 0 |
| DVVVAKDGSGKFTTVSEAVAAAPNNSETRYVIYIKAGGYFENVEVGSEKTNIMFVGDGTWKTVIKASRNVVDNSTTFRSATLAVVGTGFLARDITVENAA GPSKHQAVALRVNADLSAFYRCSFAGYQDTLYAHSLRQFYRDCDIYGTVDFIFGDAAVVLQNCNLYARRPDPNQKNVFTAQGREDPNQNTGIAIQGCKVA AAADLVPVQANFSSYLGRPWKTYSRTVFLQSKIDSLIHPRGWLEWNGSFALDTLYYAEYMNRGDGADTSARVSWPGYHVLTNATDAANFTVLNFVQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 580 Download |
| MPPPRTKHRP LLLATTFLSL LLLLLLLSLL STAHKAFAVA DDDGHRARVL LAADGGERNA 60 DAEHAAAVDR HCAGTLHRDV CVSTLSTIPN LARKPLRDVI SEVVGRAASA VRASSSNCTS 120 YLQRPRQLRT RDRLALSDCL ELFGHTLDLL GTAAAELSAG NSTAEESAAG VQTVLSAAMT 180 NQYTCLDGFA GPSASEDGRV RPFIQGRIYH VAHLVSNSLA MVRRLPTQRR RGAEEEPLEG 240 YGRVRRGFPS WVSASDRRRL QQQVAADVVV AKDGSGKFTT VSEAVAAAPN NSETRYVIYI 300 KAGGYFENVE VGSEKTNIMF VGDGTWKTVI KASRNVVDNS TTFRSATLAV VGTGFLARDI 360 TVENAAGPSK HQAVALRVNA DLSAFYRCSF AGYQDTLYAH SLRQFYRDCD IYGTVDFIFG 420 DAAVVLQNCN LYARRPDPNQ KNVFTAQGRE DPNQNTGIAI QGCKVAAAAD LVPVQANFSS 480 YLGRPWKTYS RTVFLQSKID SLIHPRGWLE WNGSFALDTL YYAEYMNRGD GADTSARVSW 540 PGYHVLTNAT DAANFTVLNF VQGDLWLNSS SFPYILGLS* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02484 | PLN02484 | 9.0e-171 | 67 | 579 | 529 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02933 | PLN02933 | 2.0e-171 | 128 | 578 | 459 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 2.0e-176 | 121 | 578 | 483 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 5.0e-177 | 131 | 578 | 454 | + pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 0 | 274 | 564 | 291 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005576 | extracellular region |
| GO:0005618 | cell wall |
| GO:0005737 | cytoplasm |
| GO:0005886 | plasma membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACQ85264.1 | 0 | 71 | 579 | 58 | 565 | pectin methylesterase [Musa acuminata AAA Group] |
| GenBank | EEC82670.1 | 0 | 1 | 579 | 1 | 579 | hypothetical protein OsI_27314 [Oryza sativa Indica Group] |
| RefSeq | NP_001060620.1 | 0 | 1 | 579 | 1 | 579 | Os07g0675100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002455538.1 | 0 | 71 | 578 | 48 | 576 | hypothetical protein SORBIDRAFT_03g012830 [Sorghum bicolor] |
| RefSeq | XP_002463382.1 | 0 | 48 | 579 | 56 | 599 | hypothetical protein SORBIDRAFT_02g042780 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 264 | 578 | 5 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 264 | 578 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 2e-24 | 267 | 535 | 5 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 2e-24 | 267 | 535 | 5 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 2e-24 | 267 | 535 | 5 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
