| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os07g48750.1 |
| Family | GH51 |
| Protein Properties | Length: 415 Molecular Weight: 45578.9 Isoelectric Point: 4.773 |
| Chromosome | Chromosome/Scaffold: 7 Start: 29182947 End: 29188670 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH51 | 1 | 283 | 0 |
| MLANLKPQFLKFPGGNYAMGNYLRNAFRWSETVGPWEERPGHFNDAWGYWTDDGLGFFEFLQLAEDLGASPVWVVNDGASQNEEVSTATIASLVKDVVDG IEFARGGPKTTWGSVRAAMGHPQPFNLDYVSIGNQECWMLYYRGNYQKFYSAIKAAYPDINVVSSCDKSTISPSNPADLYDVHVYTSSSDMFSRTSMFDN TTRSGPKAIVSEYAVTGKDAGKGTLVEALAEAAFLVGLERNSDVVEMASCAPLFVNDNDRRWSPDAIVFNSWQNYGCPNYWML | |||
| Full Sequence |
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| Protein Sequence Length: 415 Download |
| MLANLKPQFL KFPGGNYAMG NYLRNAFRWS ETVGPWEERP GHFNDAWGYW TDDGLGFFEF 60 LQLAEDLGAS PVWVVNDGAS QNEEVSTATI ASLVKDVVDG IEFARGGPKT TWGSVRAAMG 120 HPQPFNLDYV SIGNQECWML YYRGNYQKFY SAIKAAYPDI NVVSSCDKST ISPSNPADLY 180 DVHVYTSSSD MFSRTSMFDN TTRSGPKAIV SEYAVTGKDA GKGTLVEALA EAAFLVGLER 240 NSDVVEMASC APLFVNDNDR RWSPDAIVFN SWQNYGCPNY WMLHFFKDSC GATFHPSNIQ 300 ISSYNQLVAS AITWQNSKDK STYLKIKLVN FGNQAVNLSI SVSGLDEGIK SSGSKKTVLT 360 SSGPLDENSF QQPQKVAPVS SPVDNANEQM GVLVDPYSLT SFDLLLQPSK HSTI* 420 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3534 | AbfA | 1.0e-23 | 1 | 135 | 135 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 1.0e-30 | 211 | 398 | 205 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 3.0e-42 | 211 | 398 | 198 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005576 | extracellular region |
| GO:0005618 | cell wall |
| GO:0005773 | vacuole |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACR35485.1 | 0 | 1 | 414 | 250 | 663 | unknown [Zea mays] |
| DDBJ | BAC10349.1 | 0 | 1 | 414 | 251 | 664 | putative arabinoxylan narabinofuranohydrolase isoenzyme AXAH-I [Oryza sativa Japonica Group] |
| GenBank | EEC82714.1 | 0 | 1 | 414 | 184 | 597 | hypothetical protein OsI_27394 [Oryza sativa Indica Group] |
| RefSeq | NP_001060688.1 | 0 | 1 | 414 | 11 | 424 | Os07g0686900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002463418.1 | 0 | 1 | 414 | 253 | 666 | hypothetical protein SORBIDRAFT_02g043530 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 5e-16 | 2 | 407 | 57 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 5e-16 | 2 | 407 | 57 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 5e-16 | 2 | 407 | 57 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 5e-16 | 2 | 407 | 57 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 5e-16 | 2 | 407 | 57 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GT045875 | 336 | 22 | 357 | 0 |
| HO852683 | 413 | 1 | 411 | 0 |
| BE420972 | 305 | 78 | 382 | 0 |
| FL851106 | 261 | 34 | 294 | 0 |
| CO455428 | 277 | 51 | 327 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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