| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os08g01940.1 |
| Family | GH116 |
| Protein Properties | Length: 929 Molecular Weight: 101328 Isoelectric Point: 6.3249 |
| Chromosome | Chromosome/Scaffold: 8 Start: 580197 End: 586463 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH116 | 503 | 864 | 0 |
| GQVLYLEGMEYNMWNTYDVHFYASFALLSLFPELELNLQRDFVRGVLLHDPCLRRTLDGATVARKVLGAVPHDMGLNDPWFEVNAYMLHDPVRWKDLNPK FVLQVYRDVVATGNAGFAEAAWPAVYLAMAYMDQFDRDGDGMVENEGRPDQTYDLWSVSGVSAYTGGLWVAALQAAAAMAGIVGDGAAEAYFRGRYHRAR RVYTDELWNGGYFNYDNSGGATSSSIQADQLAGQWYARACGLEPIVDGDKARRALATVLDYNVMRVKGGAIGAVNGMRPDGAVDASSTQSKEVWPGVTYA VAAAMIHEGMPEAAFKTAKGIHDAGWGKHGFGYAFQTPESWTADGGYRALHYMRPLGVWAMQ | |||
| Full Sequence |
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| Protein Sequence Length: 929 Download |
| MGSSELEETK AVLHMDCEKP PAISWERTFD DEGKKVAMFS MTLNDMMAIV PLMIKMLGLN 60 LKDNAKGLAS VYDPLKKWMD NCYRGVPLGG IGAGSIGRSY RGYFQQFQIF PSIYEEKPIL 120 ANQFSAFISR PDGKRYSTVL SAPNADVLKG IDKAGIGSWD WKLKEKNCTY HGLFPRSWTV 180 YNGEPDPEIK ITCRQISPFI PHNYKESSFP VAVFTFTLHN SGSTPADVTL LFTWANSVGG 240 KSELTGNHKN SRMTTADGRP PVTFAIASRE TDGVRVTGCP RFTMGPSNSG DVTAKDMWDQ 300 INKNGSFVGD GNAAAAATGA SRPGSSIGAA VAATTTVAAG GARAVSFALS WSCPEVKFPA 360 GRTYHRRYTK FHGTDRDAAA ERLAHDALLE HMKWESQIEE WQRPILQDKS LPEWYPITLF 420 NELYYLNAGG TIWTDGQPPK NTSLSSATEP FNLDTFSTVA NGGSAVDGIL STVAVAAARS 480 NTAAAAAAAM GTALLRDGEE NVGQVLYLEG MEYNMWNTYD VHFYASFALL SLFPELELNL 540 QRDFVRGVLL HDPCLRRTLD GATVARKVLG AVPHDMGLND PWFEVNAYML HDPVRWKDLN 600 PKFVLQVYRD VVATGNAGFA EAAWPAVYLA MAYMDQFDRD GDGMVENEGR PDQTYDLWSV 660 SGVSAYTGGL WVAALQAAAA MAGIVGDGAA EAYFRGRYHR ARRVYTDELW NGGYFNYDNS 720 GGATSSSIQA DQLAGQWYAR ACGLEPIVDG DKARRALATV LDYNVMRVKG GAIGAVNGMR 780 PDGAVDASST QSKEVWPGVT YAVAAAMIHE GMPEAAFKTA KGIHDAGWGK HGFGYAFQTP 840 ESWTADGGYR ALHYMRPLGV WAMQWALSPP VLHKEHRVAA VAASPEDAAL GQEKFDKVAS 900 MLRLPEEQQH KGILRALYDT LRQLLLPS* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG4354 | COG4354 | 9.0e-30 | 80 | 435 | 368 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 5.0e-53 | 85 | 388 | 327 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 2.0e-58 | 502 | 867 | 385 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 4.0e-140 | 503 | 865 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004348 | glucosylceramidase activity |
| GO:0005773 | vacuole |
| GO:0006629 | lipid metabolic process |
| GO:0006665 | sphingolipid metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEE67921.1 | 0 | 1 | 928 | 1 | 919 | hypothetical protein OsJ_25789 [Oryza sativa Japonica Group] |
| RefSeq | NP_001060825.1 | 0 | 1 | 928 | 1 | 928 | Os08g0111200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002325943.1 | 0 | 49 | 926 | 1 | 891 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002444904.1 | 0 | 1 | 927 | 1 | 928 | hypothetical protein SORBIDRAFT_07g001140 [Sorghum bicolor] |
| RefSeq | XP_002528846.1 | 0 | 15 | 924 | 25 | 949 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EG376486 | 280 | 1 | 267 | 0 |
| CB624698 | 253 | 346 | 598 | 0 |
| EE024511 | 289 | 567 | 854 | 0 |
| DR806818 | 289 | 567 | 854 | 0 |
| CB625769 | 279 | 432 | 710 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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