| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os08g04790.1 |
| Family | GT14 |
| Protein Properties | Length: 467 Molecular Weight: 52176.2 Isoelectric Point: 6.0262 |
| Chromosome | Chromosome/Scaffold: 8 Start: 2389729 End: 2393042 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 103 | 359 | 0 |
| IAYLLEGTKGDGARMRRALQAIYHPRNQYILHLDLEAPPRERIDLAMYVKGDAMFSEVGNVRVIAKGNLVTYKGPTMVACTLHAVSILLKEGLEWDWFIN LSASDYPLVTQDDILHVFSSLPRNLNFIEHMQLSGWKVISRAKPIVVDPGLYLSKKFDLTMTTERRELPTSFKLYTGSAWIMLTKTFLEYCIWGWDNLPR TLLMYYVNFISSPEGYFHTVICNSDEFRGTAVGHDLHYIAWDYPPKQHPNMLSMKDF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 467 Download |
| MRKSWGLGRP SGDRRWLLPF AASLLVSATL FLAAACGLFS PPSLADGDDD SILIDVATWD 60 TASAAESEIK NRLLDSNSDS DDGDNPDDAA VNSDASSADP PRIAYLLEGT KGDGARMRRA 120 LQAIYHPRNQ YILHLDLEAP PRERIDLAMY VKGDAMFSEV GNVRVIAKGN LVTYKGPTMV 180 ACTLHAVSIL LKEGLEWDWF INLSASDYPL VTQDDILHVF SSLPRNLNFI EHMQLSGWKV 240 ISRAKPIVVD PGLYLSKKFD LTMTTERREL PTSFKLYTGS AWIMLTKTFL EYCIWGWDNL 300 PRTLLMYYVN FISSPEGYFH TVICNSDEFR GTAVGHDLHY IAWDYPPKQH PNMLSMKDFN 360 KMVKSGAPFA RKFPKDDKVL DKIDRELLHR SEGQFTPGAW CDGSSEGGAD PCSSRGEDSV 420 FEPSPGAERL RGLMKKVLSW DYRNGSCSSL GYDQTKRDWY VPKGRG* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 2.0e-79 | 103 | 363 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 0 | 102 | 438 | 337 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005739 | mitochondrion |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0009058 | biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ41491.1 | 0 | 1 | 466 | 1 | 449 | hypothetical protein OsJ_26015 [Oryza sativa Japonica Group] |
| RefSeq | NP_001060977.1 | 0 | 1 | 466 | 1 | 466 | Os08g0143500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001147601.1 | 0 | 1 | 466 | 1 | 482 | xylosyltransferase 2 [Zea mays] |
| RefSeq | XP_002443840.1 | 0 | 1 | 466 | 1 | 432 | hypothetical protein SORBIDRAFT_07g003140 [Sorghum bicolor] |
| RefSeq | XP_002517977.1 | 0 | 1 | 448 | 7 | 439 | acetylglucosaminyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.000005 | 119 | 332 | 101 | 298 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.000005 | 119 | 332 | 101 | 298 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.000005 | 119 | 332 | 101 | 298 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.000005 | 119 | 332 | 101 | 298 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.00002 | 119 | 332 | 101 | 298 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
