y
Basic Information | |
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Species | Oryza sativa |
Cazyme ID | LOC_Os08g10250.1 |
Family | CBM57 |
Protein Properties | Length: 281 Molecular Weight: 30872.9 Isoelectric Point: 8.8709 |
Chromosome | Chromosome/Scaffold: 8 Start: 5951164 End: 5958762 |
Description | Leucine-rich repeat transmembrane protein kinase |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM57 | 33 | 202 | 1.2e-23 |
FAVDSGGTRPIIGSDKSYYEPDDTNLGEASYYVSNSTRWGISNTGKFMEAANFSFIVYTSRQFTNTLDSVLFQTARTSSSSLRYYGIGLKNGFYNVELQF AEIFFPDNTTWTSLGTRIFDIFIQGELREKDFDIKKQTNGKSYTVVLRQYVVRVTENFMEIHLFWAGKGT |
Full Sequence |
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Protein Sequence Length: 281 Download |
MIDSSNRSIL SSGLNCLQRN TPCLPASPDD SSFAVDSGGT RPIIGSDKSY YEPDDTNLGE 60 ASYYVSNSTR WGISNTGKFM EAANFSFIVY TSRQFTNTLD SVLFQTARTS SSSLRYYGIG 120 LKNGFYNVEL QFAEIFFPDN TTWTSLGTRI FDIFIQGELR EKDFDIKKQT NGKSYTVVLR 180 QYVVRVTENF MEIHLFWAGK GTCCIPRQGS YGPLISALSV SPYGGNNKVD PGPIKNSAGK 240 SKIALVAGVV VCTIVLGLLS TGTFLWRQKR KKMEAEMGGS * 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam12819 | Malectin_like | 0.0009 | 88 | 218 | 136 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
PLN03150 | PLN03150 | 2.0e-5 | 103 | 220 | 121 | + hypothetical protein; Provisional | ||
pfam11721 | Malectin | 2.0e-50 | 32 | 218 | 189 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. |
Gene Ontology | |
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GO Term | Description |
GO:0000166 | nucleotide binding |
GO:0005575 | cellular_component |
GO:0005886 | plasma membrane |
GO:0006464 | cellular protein modification process |
GO:0016301 | kinase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF23132.2 | 0 | 1 | 280 | 372 | 651 | Os08g0202300 [Oryza sativa Japonica Group] |
DDBJ | BAG98816.1 | 0 | 1 | 280 | 1 | 280 | unnamed protein product [Oryza sativa Japonica Group] |
GenBank | EAY95560.1 | 0 | 1 | 277 | 221 | 475 | hypothetical protein OsI_17408 [Oryza sativa Indica Group] |
GenBank | EEE68215.1 | 0 | 9 | 280 | 354 | 625 | hypothetical protein OsJ_26387 [Oryza sativa Japonica Group] |
RefSeq | NP_001061218.1 | 0 | 1 | 280 | 205 | 484 | Os08g0202300 [Oryza sativa (japonica cultivar-group)] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2kr2_A | 0.004 | 96 | 166 | 53 | 117 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 2k46_A | 0.004 | 96 | 166 | 53 | 117 | A Chain A, Xenopus Laevis Malectin Complexed With Nigerose (Glcalpha1- 3glc) |
PDB | 2jwp_A | 0.005 | 96 | 166 | 49 | 113 | A Chain A, Malectin |