CAZyme Information

Basic Information
SpeciesOryza sativa
Cazyme IDLOC_Os08g10300.1
FamilyCBM57
Protein PropertiesLength: 1024 Molecular Weight: 112151 Isoelectric Point: 7.4015
ChromosomeChromosome/Scaffold: 8 Start: 5998021 End: 6005220
DescriptionLeucine-rich repeat transmembrane protein kinase
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
CBM574386089.6e-26
  FAVDSGSNRSVRGLDNTVYEADATSLGAASYYVTGQTRWGISNVGKFNEAPNGSYLMYSSQQFQNALDSELFQTARMSPSSLRYYGLGLENGNYTVLLQF
  AEFAYPDTKTWQSIGRRVFDIYVQGDLKEKNFDVRKTAGGKSFIAVNKRYNATVSKNFLEIHLFWAGKGTC
Full Sequence
Protein Sequence     Length: 1024     Download
MMRIRCSSSS SGGHGGHQLI LCWLVIACSW VAVARAQAQK PAGATTDPVE VAALNTILGR    60
WGTKPPKTWN ITGGDPCTGT AVDDTDIDNN PIVNPGIKCD CTFNNNTVCR IVKLRVYALN    120
VVGQIPAELE KLTHLANLNL MQNYLTGPVP SFFGKFPMQY LSLAINPLSG PLPKELGNLT    180
NLISLGISLN NFTGNLPEEL GNLTKLEQMY IDSSGFSGPF PSTISKLKKL KILWISDNDF    240
TGKIPDFIGS LTNLEDLRLQ GNSFQGPIPA SFSKLTKLTS LRIGDIVNGS SSLAFISNLT    300
SLNVLILRNC KISDNLGAVN FTKLSRLNLL DLSFNNITGE VPQSILNLNS LRYLFLGNNS    360
LTGSLPDVKS SSLNNLDFSY NQLMGNFPSW ATNNNLQLNL VANKFNIRSN NDSILPSGLN    420
CLQQDTPCFL GSPEYYSFAV DSGSNRSVRG LDNTVYEADA TSLGAASYYV TGQTRWGISN    480
VGKFNEAPNG SYLMYSSQQF QNALDSELFQ TARMSPSSLR YYGLGLENGN YTVLLQFAEF    540
AYPDTKTWQS IGRRVFDIYV QGDLKEKNFD VRKTAGGKSF IAVNKRYNAT VSKNFLEIHL    600
FWAGKGTCCI PTQGYYGPMI SALSITPNFT PTVRNGVPKK KSKAGVIAGI VIGASVIGSA    660
ALLGIFVLVK KRRKAARQQE ELYNLVGRPN IFSSAELKLA TDNFSSQNVI GEGGYGPVYK    720
GSFFDRGKSE FVTEVATISA VQHKNLVKLY GCCIDSSTPL LVYEYLENGS LDQALFGHGS    780
LNLDWPTRFE IILGIARGIT YLHEESSIRI VHRDIKASNV LLDTDLSPQI SDFGLAKLYD    840
EKETHISTKI AGTFGYLAPE YAMRGHLTEK ADVFAFGVVA LETVAGRSNT DNSLDNDKIY    900
LFEWAWGLYE REQGIKIVDP KLDEFDSEEA FRVIYAALLC TQGSPHQRPP MSRVLAILTG    960
DIEMTEMVTK PSYITEWQLR GGNTSYISSN YSSGSTTGEF REQRETSPLT PSPTITGVTY    1020
DGR* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
smart00219TyrKc3.0e-40709879191+
cd00192PTKc1.0e-40708959287+
smart00221STYKc1.0e-40709879195+
cd00180PKc5.0e-41710882191+
pfam11721Malectin2.0e-56436623190+
Gene Ontology
GO TermDescription
GO:0000166nucleotide binding
GO:0004672protein kinase activity
GO:0005515protein binding
GO:0005524ATP binding
GO:0005886plasma membrane
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAY67902.105102361027SHR5-receptor-like kinase [Saccharum hybrid cultivar SP70-1143]
DDBJBAD03117.10210231976putative Receptor-like serine/threonine kinase(RFK1) [Oryza sativa Japonica Group]
GenBankEEE68220.10110231969hypothetical protein OsJ_26392 [Oryza sativa Japonica Group]
RefSeqNP_001061221.10361023511037Os08g0203100 [Oryza sativa (japonica cultivar-group)]
RefSeqXP_002444009.104102361009hypothetical protein SORBIDRAFT_07g005820 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3ulz_A068696114309A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger
PDB3uim_A068696114309A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation
PDB3tl8_H068696122317B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB3tl8_G068696122317B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB3tl8_D068696122317B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
Transmembrane Domains
StartEnd
647669
Signal Peptide
Cleavage Site
36
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
CB6273832742505230
CB6429302632975590
CB633864269333010
CB633753269523200
JG9062782943276200
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_030_00368.2Aquca_030_00368.1
Arabidopsis lyrata883240.424.594883240.424.594892639892640892638
Arabidopsis thalianaAT1G56130.1AT1G56140.1AT1G56120.1AT1G56145.2AT1G56145.1
Brachypodium distachyonBradi5g21870.2Bradi5g21857.1Bradi3g17756.2Bradi3g17756.1Bradi1g48230.1
Brassica rapaBra003333Bra007909Bra007908Bra030813Bra030815
Bra033670Bra035966Bra033958Bra007907Bra016226
Carica papayaevm.model.supercontig_2207.1evm.model.supercontig_748.4
Capsella rubellaCarubv10008172mCarubv10012587mCarubv10010895mCarubv10008256mCarubv10008071m.409.563
Carubv10008071m.409.563Carubv10008183m
Citrus clementinaCiclev10007054mCiclev10007687mCiclev10007686mCiclev10018029mCiclev10018038m
Ciclev10014641mCiclev10014117m
Citrus sinensisorange1.1g001658morange1.1g008072morange1.1g006515morange1.1g006206morange1.1g004413m
orange1.1g002562morange1.1g002581morange1.1g038019m
Cucumis sativusCucsa.239700.2Cucsa.239700.1
Eucalyptus grandisEucgr.F04434.2Eucgr.F04434.1Eucgr.F04306.1Eucgr.F04441.1Eucgr.F02391.1
Eucgr.F04436.1Eucgr.C02767.1Eucgr.L01594.1Eucgr.F04301.1Eucgr.L01787.1
Eucgr.B01468.1Eucgr.F04437.1
Fragaria vescamrna11624.1-v1.0-hybridmrna16334.1-v1.0-hybridmrna30033.1-v1.0-hybridmrna28048.1-v1.0-hybrid
Glycine maxGlyma09g15200.3Glyma09g15200.2Glyma09g15200.1Glyma08g25590.2Glyma08g25600.2
Glyma08g25600.1
Gossypium raimondiiGorai.002G105800.1Gorai.001G034000.1Gorai.011G052100.1Gorai.N011200.1Gorai.011G052400.2
Gorai.011G052400.1Gorai.001G131900.1Gorai.006G091400.1Gorai.011G052300.5Gorai.011G052300.4
Gorai.011G052300.3Gorai.011G052300.2Gorai.011G052300.1Gorai.011G052000.1Gorai.011G052600.8
Gorai.011G052600.7Gorai.011G052600.6Gorai.011G052600.5Gorai.011G052600.4Gorai.011G052600.3
Gorai.011G052600.2Gorai.011G052600.1
Linum usitatissimumLus10031199
Malus domesticaMDP0000210289MDP0000183693.203.372MDP0000183693.203.372MDP0000213902MDP0000251746
MDP0000269684MDP0000267728MDP0000281046MDP0000207688MDP0000183693.772.939
MDP0000183693.772.939MDP0000389758MDP0000278907MDP0000306337MDP0000384033
MDP0000171164MDP0000307776MDP0000212717MDP0000311945MDP0000308237
MDP0000283397MDP0000122720
Manihot esculentacassava4.1_001509mcassava4.1_001407mcassava4.1_025733mcassava4.1_030674m
Mimulus guttatusmgv1a002601mmgv1a018669mmgv1a000612m
Oryza sativaLOC_Os04g22470.1LOC_Os08g10290.1LOC_Os04g52640.3LOC_Os04g52640.2LOC_Os04g52640.1
LOC_Os04g52600.1LOC_Os04g52630.1LOC_Os05g17810.1LOC_Os04g52614.1LOC_Os08g10330.1
LOC_Os05g17604.6LOC_Os05g17604.5LOC_Os05g17604.4LOC_Os05g17604.3LOC_Os05g17604.2
LOC_Os05g17604.1LOC_Os05g16430.1LOC_Os08g10320.3LOC_Os08g10320.2LOC_Os08g10320.1
LOC_Os08g10310.3LOC_Os08g10310.2LOC_Os08g10310.1LOC_Os04g52606.1LOC_Os05g16930.1
LOC_Os06g07130.1LOC_Os04g52590.1LOC_Os08g10250.1LOC_Os05g16824.4LOC_Os05g16824.3
LOC_Os05g16824.2LOC_Os05g16824.1LOC_Os05g16740.1
Panicum virgatumPavirv00010367mPavirv00021132mPavirv00063388mPavirv00039446mPavirv00006527m
Pavirv00041471mPavirv00039639mPavirv00031150mPavirv00014784mPavirv00036213m
Pavirv00070332mPavirv00032467mPavirv00022623mPavirv00048042m
Physcomitrella patensPp1s244_27V6.2
Phaseolus vulgarisPhvul.011G169300.1
Picea abiesMA_170647g0010MA_162469g0010MA_73800g0010MA_8849269g0010MA_18275g0010
MA_17053g0010MA_954053g0010MA_54077g0010MA_10436782g0010MA_404302g0010
MA_461914g0010
Populus trichocarpaPotri.006G255100.2Potri.018G026800.2Potri.018G026800.1Potri.006G255100.1Potri.001G082900.5
Potri.001G082900.4Potri.001G082900.3Potri.001G082900.2Potri.001G082900.1Potri.003G148000.3
Potri.003G148000.2Potri.003G148000.1Potri.007G067900.3Potri.007G067900.2Potri.007G067900.1
Prunus persicappa017326mppa017049mppa001211mppa001152mppa000802m
ppa015982mppa026535m
Ricinus communis29848.m00461730169.m00632829497.m00008929624.m000325
Setaria italicaSi013203mSi013191mSi013178mSi009240mSi012655m
Si009468mSi009463mSi009322mSi028769mSi028790m
Si009325mSi009466mSi009259mSi006097m
Selaginella moellendorffii438852
Sorghum bicolorSb07g005820.1Sb06g028570.1Sb06g028560.1Sb10g004730.1
Thellungiella halophilaThhalv10012006mThhalv10018064mThhalv10011215mThhalv10016280mThhalv10016175m
Thhalv10019658mThhalv10012222m
Vitis viniferaGSVIVT01037993001.434.602GSVIVT01037993001.434.602GSVIVT01035865001GSVIVT01013621001GSVIVT01029720001.503.674
GSVIVT01029720001.503.674GSVIVT01037982001GSVIVT01038011001GSVIVT01013608001GSVIVT01013612001
GSVIVT01029718001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)