| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os08g10320.2 |
| Family | CBM57 |
| Protein Properties | Length: 1000 Molecular Weight: 110564 Isoelectric Point: 8.403 |
| Chromosome | Chromosome/Scaffold: 8 Start: 6032171 End: 6039155 |
| Description | Leucine-rich repeat transmembrane protein kinase |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM57 | 406 | 576 | 5.6e-24 |
| FAVDCGSNRSIRGSDNTMYELDFTDLGSSSYYVTSETRWGVSNVGKYFQSPNDSKIIYSNEKIQNAVVSELLQTARMSPSSLRYFGLGLENGNYTVLLQF AELGYPDSPTWKSLGRRVFDIYIQGDLKEKDFDIRKMAGGKSFTAVYKSYTATVSKNFLEIHLFWAGKGTC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1000 Download |
| MADFSCSGSA TTKNRSCRSG GAGGDPGEME QDQFAGVEHE RRAMPRRPRR RRHRPRRQPQ 60 EQPRHQVRLL LHQRHRLPYH PAVYALNVVG QIPAELQNLT YLNYLDLDQN YLSGPIPSFI 120 GQLTALTELH VGFNALSGPI PKELGNLTNL NLLGISLTNF TGQLPEELGN LTKLQRLYTD 180 SAGLSGPFPS TFSKLKNLKL LRASDNDFTG KIPDYIGSLT NLEDLAFQGN SFEGPIPESL 240 SNLTKLTTLR IGDIVSGSSS FAFVSSLTSL NILVLRNCRI SGDLGAVDFS KFTKLAFLDL 300 SFNNISGKVP QSILNLQMLT DLFLGNNSLT GGLPDGISPS LKNLDFSYNQ LTGSFPSWAT 360 QNNLQLNLVA NNFDLGSTNN GILPPGLNCL QKDTPCLRGS PEYYSFAVDC GSNRSIRGSD 420 NTMYELDFTD LGSSSYYVTS ETRWGVSNVG KYFQSPNDSK IIYSNEKIQN AVVSELLQTA 480 RMSPSSLRYF GLGLENGNYT VLLQFAELGY PDSPTWKSLG RRVFDIYIQG DLKEKDFDIR 540 KMAGGKSFTA VYKSYTATVS KNFLEIHLFW AGKGTCCIPI QGYYGPLISA LSITPNFTPT 600 VRNGVPKRKS KVGAIAGISI GASVVGLAAL FGIFMFIKKR RRLAQQQGEL YNLVGRPDVF 660 SNAELKLATN NYSSQNILGE GGYGPVYKGM LPDGRVIAVK QLSQSSHQGK NQFVTEVATI 720 SSVQHRNLVK LHGCCIDSNT PLLVYEYLEN GSLDQALFRK NSLKLDWATR FEIILGIARG 780 LTYLHEESSV RIVHRDIKAS NVLLDTDLTP KISDFGLARL YDEKKTHVST GIAGTFGYLA 840 PEYAMRRHLT EKVDVYAFGV VALETVAGRS NTNNSIEESK IYLLEWAWDL YEKEQAQRIV 900 DPRLEDFNKD EVLRVIHVAL LCTQGSPNQR PPMSRVMAVL TGDAEVVEMV TKPSYITEWQ 960 YRDGNSTNSE STTSEFSRQK EIDPLTMSPT ITGSSHDGR* 1020 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00221 | STYKc | 2.0e-47 | 677 | 861 | 192 | + Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. | ||
| pfam00069 | Pkinase | 1.0e-47 | 677 | 914 | 250 | + Protein kinase domain. | ||
| smart00219 | TyrKc | 2.0e-49 | 677 | 861 | 191 | + Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily. | ||
| cd00180 | PKc | 1.0e-50 | 678 | 864 | 191 | + Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. | ||
| pfam11721 | Malectin | 6.0e-57 | 404 | 591 | 190 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000166 | nucleotide binding |
| GO:0004672 | protein kinase activity |
| GO:0005515 | protein binding |
| GO:0005524 | ATP binding |
| GO:0005886 | plasma membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAY67902.1 | 0 | 83 | 999 | 107 | 1027 | SHR5-receptor-like kinase [Saccharum hybrid cultivar SP70-1143] |
| GenBank | EEC78858.1 | 0 | 83 | 991 | 106 | 1018 | hypothetical protein OsI_19210 [Oryza sativa Indica Group] |
| RefSeq | NP_001061221.1 | 0 | 83 | 999 | 129 | 1037 | Os08g0203100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001061223.1 | 0 | 83 | 997 | 102 | 1020 | Os08g0203400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002444009.1 | 0 | 83 | 999 | 112 | 1009 | hypothetical protein SORBIDRAFT_07g005820 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ulz_A | 0 | 644 | 943 | 6 | 309 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 3uim_A | 0 | 644 | 943 | 6 | 309 | A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation |
| PDB | 3tl8_H | 0 | 644 | 943 | 14 | 317 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 3tl8_G | 0 | 644 | 943 | 14 | 317 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 3tl8_D | 0 | 644 | 943 | 14 | 317 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
