| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os08g12410.1 |
| Family | CE8 |
| Protein Properties | Length: 395 Molecular Weight: 43434.1 Isoelectric Point: 7.2638 |
| Chromosome | Chromosome/Scaffold: 8 Start: 7325121 End: 7327754 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 76 | 375 | 0 |
| AVVAADGTGQYTTIKQAVKAAEADTSGRRYTIHVKAGKYVEDVEIWRPNITMIGDGIGRTIISGMKSKNKNRGTACTGTLNVQKDGFIARELTVENTAGP QAMQAAAVVVKSDRAVFFRCEITGYQDTLLADVYRQFYRECVISGTIDFVWGEATAVFQMCHLLVRRPLEGSHNTITAQGRNHSEPVVARSGFVFQECNV STKEDLRGVDTYLGRPWHPDSRVIFMSSYLDGNVVNPKGWVAWRINNATDERSTASTVYYAEYNNTGAGANVTQRVNWHGFHLLAPHEVRNFTVDSFIDG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 395 Download |
| MKQYYKAALL RYWVVVPFLL WLVATEEQLA AGAVAGAAAE SSSTWGGQGQ LQLPLWVRPG 60 DRRLLGMSVA GMAVDAVVAA DGTGQYTTIK QAVKAAEADT SGRRYTIHVK AGKYVEDVEI 120 WRPNITMIGD GIGRTIISGM KSKNKNRGTA CTGTLNVQKD GFIARELTVE NTAGPQAMQA 180 AAVVVKSDRA VFFRCEITGY QDTLLADVYR QFYRECVISG TIDFVWGEAT AVFQMCHLLV 240 RRPLEGSHNT ITAQGRNHSE PVVARSGFVF QECNVSTKED LRGVDTYLGR PWHPDSRVIF 300 MSSYLDGNVV NPKGWVAWRI NNATDERSTA STVYYAEYNN TGAGANVTQR VNWHGFHLLA 360 PHEVRNFTVD SFIDGGSWLP ETNVPYHLDL DLGL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02468 | PLN02468 | 1.0e-94 | 52 | 390 | 343 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 2.0e-95 | 52 | 390 | 346 | + pectinesterase | ||
| PLN02745 | PLN02745 | 3.0e-100 | 53 | 390 | 345 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02201 | PLN02201 | 6.0e-103 | 49 | 386 | 348 | + probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 3.0e-118 | 85 | 375 | 298 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0008150 | biological_process |
| GO:0008152 | metabolic process |
| GO:0016787 | hydrolase activity |
| GO:0030234 | enzyme regulator activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ06024.1 | 0 | 1 | 394 | 1 | 397 | hypothetical protein OsI_28269 [Oryza sativa Indica Group] |
| GenBank | EEE68246.1 | 0 | 235 | 394 | 1 | 160 | hypothetical protein OsJ_26449 [Oryza sativa Japonica Group] |
| RefSeq | NP_001061267.1 | 0 | 1 | 394 | 1 | 394 | Os08g0220400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001147569.1 | 0 | 54 | 390 | 210 | 557 | pectinesterase PPE8B [Zea mays] |
| RefSeq | XP_002444448.1 | 0 | 54 | 386 | 238 | 578 | hypothetical protein SORBIDRAFT_07g022090 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 75 | 390 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 75 | 386 | 4 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 4e-23 | 73 | 349 | 6 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 4e-23 | 73 | 349 | 6 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 4e-23 | 73 | 349 | 6 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Transmembrane Domains | |||||
|---|---|---|---|---|---|
 | |||||
| Start | End | ||||
| 7 | 24 | ||||
| Signal Peptide | |||||
|---|---|---|---|---|---|
 | |||||
| Cleavage Site | |||||
| 25 | |||||
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| CK042794 | 196 | 23 | 218 | 0 |
| DY361529 | 287 | 112 | 394 | 0 |
| DY946604 | 293 | 96 | 386 | 0 |
| DY948282 | 295 | 98 | 390 | 0 |
| EL419338 | 285 | 107 | 390 | 0 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Oryza sativa | LOC_Os11g36240.1 | ||||
| Panicum virgatum | Pavirv00057340m | ||||
| Setaria italica | Si022417m | Si019968m | Si025266m.144.297 | Si025266m.144.297 | |
| Sorghum bicolor | Sb05g000900.1 | Sb04g037740.1 | |||
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |