| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os08g14700.1 |
| Family | CBM43 |
| Protein Properties | Length: 578 Molecular Weight: 60876.5 Isoelectric Point: 4.934 |
| Chromosome | Chromosome/Scaffold: 8 Start: 8837255 End: 8839386 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 467 | 548 | 1.1e-30 |
| WCVAKSEVGDARLQNALDYACGSCADCSAIQPGAQCFDPDTKVAHATYAFNNFYQTTGRASGSCDFAGAASIVNQQPKIGNC | |||
| CBM43 | 381 | 459 | 1.7e-31 |
| WCVARADVGSAALQSALDFACGNGADCSAIQQGSVCFEPNTLVAHASYAFNDYYQRKGQASGTCDFSGAASIVFKPSPS | |||
| GH17 | 29 | 366 | 0 |
| IGVCYGRDAKDLIDPPAAVSLLKANGISAVRIFDADPTVLAAMANTGIKVMVAIPNADLAAAGQDLRSATDWVASNVAPYRSRGTLISGVAVGNEVFRQR PELTGALVSAMRNVHRALENLNLANDVKVSTPIAFDALKQSSPPSAGEFKDEIAQSVMKPMIDFLKQTGSFFMVNLYPYFAYVAQPDKISLEFATFRPNA GVLDGNTDIRYFSLFDAQLDAVYAAINRVSGGSLTVSMARRDGILSVQASESGHPSGGRFPLSSMLAAADTDSVATIANAQAYNNGLIRRVVSGASGMRD VSAYIFSLFNENEKPGPTIERNFGLFYPNGQKVYEVDF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 578 Download |
| MVLTHLLCSL LLATALLLLS ISRTDAGEIG VCYGRDAKDL IDPPAAVSLL KANGISAVRI 60 FDADPTVLAA MANTGIKVMV AIPNADLAAA GQDLRSATDW VASNVAPYRS RGTLISGVAV 120 GNEVFRQRPE LTGALVSAMR NVHRALENLN LANDVKVSTP IAFDALKQSS PPSAGEFKDE 180 IAQSVMKPMI DFLKQTGSFF MVNLYPYFAY VAQPDKISLE FATFRPNAGV LDGNTDIRYF 240 SLFDAQLDAV YAAINRVSGG SLTVSMARRD GILSVQASES GHPSGGRFPL SSMLAAADTD 300 SVATIANAQA YNNGLIRRVV SGASGMRDVS AYIFSLFNEN EKPGPTIERN FGLFYPNGQK 360 VYEVDFRGGG GGGACPTKTS WCVARADVGS AALQSALDFA CGNGADCSAI QQGSVCFEPN 420 TLVAHASYAF NDYYQRKGQA SGTCDFSGAA SIVFKPSPSI CDPNPSWCVA KSEVGDARLQ 480 NALDYACGSC ADCSAIQPGA QCFDPDTKVA HATYAFNNFY QTTGRASGSC DFAGAASIVN 540 QQPKIGNCVL PPNNAWTTEQ TAIEDQSTAN LPATAWQ* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 2.0e-20 | 466 | 537 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| pfam07983 | X8 | 2.0e-24 | 380 | 451 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-35 | 466 | 549 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| smart00768 | X8 | 5.0e-37 | 380 | 461 | 83 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-85 | 29 | 366 | 341 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005623 | cell |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC84503.1 | 0 | 25 | 577 | 26 | 577 | putative beta-1,3-glucanase [Oryza sativa Japonica Group] |
| GenBank | EEC82201.1 | 0 | 25 | 577 | 26 | 542 | hypothetical protein OsI_26343 [Oryza sativa Indica Group] |
| GenBank | EEE67336.1 | 0 | 25 | 577 | 53 | 604 | hypothetical protein OsJ_24592 [Oryza sativa Japonica Group] |
| RefSeq | NP_001059883.1 | 0 | 1 | 555 | 1 | 553 | Os07g0539100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001061351.1 | 0 | 1 | 577 | 1 | 577 | Os08g0244500 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 29 | 366 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 28 | 366 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 28 | 366 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_B | 0 | 28 | 366 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_A | 0 | 28 | 366 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
