| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os08g20660.1 |
| Family | GT4 |
| Protein Properties | Length: 1067 Molecular Weight: 118725 Isoelectric Point: 6.3488 |
| Chromosome | Chromosome/Scaffold: 8 Start: 12411932 End: 12424769 |
| Description | sucrose phosphate synthase 1F |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 490 | 658 | 0 |
| SNPRKPMILALARPDPKKNITTLVKAFGEHRELRNLANLTLIMGNRDVIDEMSSTNSAVLTSILKLIDKYDLYGQVAYPKHHKQSEVPDIYRLAARTKGV FINCAFIEPFGLTLIEAAAYGLPMVATRNGGPVDIHRVLDNGILVDPHNQNEIAEALYKLVSDKQLWAQ | |||
| Full Sequence |
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| Protein Sequence Length: 1067 Download |
| MAGNDWINSY LEAILDAGGA AGEISAAAGG GGDGAAATGE KRDKSSLMLR ERGRFSPARY 60 FVEEVISGFD ETDLYKTWVR TAAMRSPQER NTRLENMSWR IWNLARKKKQ IEGEEASRLA 120 KQRLEREKAR RYAAADMSED LSEGEKGENI NESSSTHDES TRGRMPRIGS TDAIEAWASQ 180 HKDKKLYIVL ISIHGLIRGE NMELGRDSDT GGQVKYVVEL ARALGSTPGV YRVDLLTRQI 240 SAPDVDWSYG EPTEMLSPRN SENFGHDMGE SSGAYIVRIP FGPRDKYIPK EHLWPHIQEF 300 VDGALVHIMQ MSKVLGEQVG SGQLVWPVVI HGHYADAGDS AALLSGALNV PMIFTGHSLG 360 RDKLEQLLKQ GRQTRDEINT IYKIMRRIEA EELCLDASEI IITSTRQEIE QQWGLYDGFD 420 LTMARKLRAR IKRGVSCYGR YMPRMIAVPP GMEFSHIVPH DVDQDGEEAN EDGSGSTDPP 480 IWADIMRFFS NPRKPMILAL ARPDPKKNIT TLVKAFGEHR ELRNLANLTL IMGNRDVIDE 540 MSSTNSAVLT SILKLIDKYD LYGQVAYPKH HKQSEVPDIY RLAARTKGVF INCAFIEPFG 600 LTLIEAAAYG LPMVATRNGG PVDIHRVLDN GILVDPHNQN EIAEALYKLV SDKQLWAQCR 660 QNGLKNIHQF SWPEHCKNYL SRVGTLKPRH PRWQKSDDAT EVSEADSPGD SLRDVHDISL 720 NLKLSLDSEK SSTKENSVRR NLEDAVQKLS RGVSANRKTE SVENMEATTG NKWPSLRRRK 780 HIVVIAIDSV QDANLVEIIK NIFVASSNER LSGSVGFVLS TSRAISEVHS LLTSGGIEAT 840 DFDAFICNSG SDLCYPSSNS EDMLSPAELP FMIDLDYHTQ IEYRWGGEGL RKTLICWAAE 900 KSEGGQVVLV EDEECSSTYC ISFRVKNAEA VPPVKELRKT MRIQALRCHV LYSHDGSKLN 960 VIPVLASRSQ ALRYLYIRWG VELSNMTVVV GESGDTDYEG LLGGVHKTII LKGSFNAVPN 1020 QVHAARSYSL QDVISFDKPG ITSIEGYGPD NLKSALQQFG ILKDNV* 1080 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00142 | PLN00142 | 7.0e-29 | 188 | 686 | 555 | + sucrose synthase | ||
| TIGR02470 | sucr_synth | 1.0e-43 | 188 | 686 | 535 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03800 | GT1_Sucrose_synthase | 5.0e-137 | 187 | 681 | 496 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
| TIGR02472 | sucr_P_syn_N | 2.0e-165 | 186 | 681 | 498 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
| TIGR02468 | sucrsPsyn_pln | 0 | 1 | 1060 | 1076 | + sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005575 | cellular_component |
| GO:0005829 | cytosol |
| GO:0005886 | plasma membrane |
| GO:0005975 | carbohydrate metabolic process |
| GO:0005985 | sucrose metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAQ56529.1 | 0 | 1 | 1066 | 1 | 1066 | putative sucrosephosphate synthase [Oryza sativa Japonica Group] |
| DDBJ | BAI39704.1 | 0 | 1 | 1066 | 1 | 1066 | putative sucrose-phosphate synthase [Oryza sativa Indica Group] |
| GenBank | EAZ06480.1 | 0 | 1 | 1066 | 1 | 1094 | hypothetical protein OsI_28718 [Oryza sativa Indica Group] |
| GenBank | EAZ42258.1 | 0 | 1 | 1066 | 1 | 1122 | hypothetical protein OsJ_26822 [Oryza sativa Japonica Group] |
| RefSeq | NP_001061495.1 | 0 | 1 | 1066 | 1 | 1066 | Os08g0301500 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2r68_A | 0 | 209 | 689 | 31 | 462 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 2r66_A | 0 | 209 | 689 | 31 | 462 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 2r60_A | 0 | 209 | 689 | 31 | 462 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 3s29_H | 2e-35 | 188 | 685 | 281 | 768 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 3s29_G | 2e-35 | 188 | 685 | 281 | 768 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| sucrose biosynthesis | SUCROSE-PHOSPHATE-SYNTHASE-RXN | EC-2.4.1.14 | sucrose-phosphate synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO780468 | 453 | 1 | 453 | 0 |
| HO796578 | 428 | 182 | 599 | 0 |
| HO796578 | 85 | 577 | 661 | 6e-37 |
| HO796578 | 25 | 670 | 694 | 6e-37 |
| HO796578 | 46 | 70 | 115 | 0.0000001 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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