| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os08g23720.1 |
| Family | CBM43 |
| Protein Properties | Length: 500 Molecular Weight: 53754.6 Isoelectric Point: 6.9706 |
| Chromosome | Chromosome/Scaffold: 8 Start: 14349346 End: 14354637 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 376 | 455 | 1.3e-25 |
| WCVANPGRDLNNVENHLKLACTMADCTTLYYGGSCNAIGEKGNISYAFNSYYQLRKQDAQSCDFDGLGMITYLDPSIGDC | |||
| GH17 | 36 | 355 | 0 |
| VGVNWGTVSAHRMPAPVVVELMRANRIGRVKLFDADQAALRALMGSGLQVMVGITNEMLQGIAASPAAADAWVARNVSRYVGPGGADIRYIAVGNEPFLT SYQGQFQSYVLPAMTNIQQSLVKANLARYIKLVVPCNADAYQSASVPSQGVFRPDLIQIITQLAAFLSSSGAPFVVNIYPFLSLYQSSDFPQDYAFFDGS SHPVVDGPNVYYNAFDGNFDTLVSALSKIGYGQLPIAIGEVGWPTEGAPSANLTAARAFTQGLISHVLSNKGTPLRPGVPPMDVYLFSLLDEEQKSTLPG NFERHWGVFSFDGQAKYPLN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 500 Download |
| MAAANAGAMV RFVAAFLAAV LVMMVPCAPR AAAAAVGVNW GTVSAHRMPA PVVVELMRAN 60 RIGRVKLFDA DQAALRALMG SGLQVMVGIT NEMLQGIAAS PAAADAWVAR NVSRYVGPGG 120 ADIRYIAVGN EPFLTSYQGQ FQSYVLPAMT NIQQSLVKAN LARYIKLVVP CNADAYQSAS 180 VPSQGVFRPD LIQIITQLAA FLSSSGAPFV VNIYPFLSLY QSSDFPQDYA FFDGSSHPVV 240 DGPNVYYNAF DGNFDTLVSA LSKIGYGQLP IAIGEVGWPT EGAPSANLTA ARAFTQGLIS 300 HVLSNKGTPL RPGVPPMDVY LFSLLDEEQK STLPGNFERH WGVFSFDGQA KYPLNLGLGS 360 PVLKNAKDVP YLPPRWCVAN PGRDLNNVEN HLKLACTMAD CTTLYYGGSC NAIGEKGNIS 420 YAFNSYYQLR KQDAQSCDFD GLGMITYLDP SIGDCRFLVG IDDSRTSTIY SSGDCSRRRF 480 GLWILAFLVI GFLQIGVYL* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.002 | 180 | 347 | 174 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 3.0e-16 | 375 | 444 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-29 | 376 | 457 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-71 | 36 | 355 | 322 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005623 | cell |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF23465.2 | 0 | 36 | 479 | 106 | 549 | Os08g0326500 [Oryza sativa Japonica Group] |
| GenBank | EAZ06546.1 | 0 | 36 | 479 | 36 | 479 | hypothetical protein OsI_28792 [Oryza sativa Indica Group] |
| GenBank | EAZ42319.1 | 0 | 36 | 479 | 36 | 496 | hypothetical protein OsJ_26891 [Oryza sativa Japonica Group] |
| RefSeq | NP_001061551.1 | 0 | 36 | 479 | 36 | 479 | Os08g0326500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002459936.1 | 0 | 32 | 495 | 24 | 488 | hypothetical protein SORBIDRAFT_02g017290 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 36 | 356 | 2 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 3f55_C | 0 | 36 | 356 | 2 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 3f55_B | 0 | 36 | 356 | 2 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 3f55_A | 0 | 36 | 356 | 2 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 3em5_D | 0 | 36 | 356 | 2 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
