y
Basic Information | |
---|---|
Species | Oryza sativa |
Cazyme ID | LOC_Os08g23780.1 |
Family | GT8 |
Protein Properties | Length: 644 Molecular Weight: 73496 Isoelectric Point: 9.2673 |
Chromosome | Chromosome/Scaffold: 8 Start: 14397923 End: 14403073 |
Description | galacturonosyltransferase 4 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT8 | 305 | 615 | 0 |
CLPLRLANEYFLLDPSHQQFPNKEKLDDPKLYHYALFSDNILAAAVVVNSTVLNAKHPSHHVFHIVTDRLNYAPMRMWFLSNPPGKATIEVRNIEEFTWL NASYSPVLKQLESQSMIDYYFRTHRANSDSNLKYRNPKYLSILNHLRFYLPEIYPNLHKIVFLDDDVVIKKDLTSLWSIDMKGKVIGVVETCGESFHRFD RYLNFSNPVIVKNFDPHACGWAFGMNVFDLAEWRRQNITEIYHSWQKLNQDRLLWKLGTLPPGLITFWNKTLPLNRSWHVLGLGYNPHVSSRDIERAAVI HYNGNMKPWLE |
Full Sequence |
---|
Protein Sequence Length: 644 Download |
MVRRRRRSVL LLLLALTVLS PLVLYTRRLS AALNPNQRRD LPGEIVNQGR GVKASKLNAL 60 PLETVGSLKE PVGIVFSEES RESASKSTEP DSQEFLLRKA GEHKNRVLSE ATAADSARSE 120 DDDLIEQVTS KDGEDDGLAT VSVDQQQITT ASQQRSASEA SSLENVPEQT SMENSLEGNK 180 DGALLDTRIR NIRDLLIKAK VYLGLGAIRA NPQYLKDLRQ RIREVQKVLG DASKDSDLPK 240 NANEKVKTLE QTLIKGKLMQ DDCSVVVKKL RAMLHSAEEQ LHAHKKQTVF LTQLAAKTLP 300 KGLHCLPLRL ANEYFLLDPS HQQFPNKEKL DDPKLYHYAL FSDNILAAAV VVNSTVLNAK 360 HPSHHVFHIV TDRLNYAPMR MWFLSNPPGK ATIEVRNIEE FTWLNASYSP VLKQLESQSM 420 IDYYFRTHRA NSDSNLKYRN PKYLSILNHL RFYLPEIYPN LHKIVFLDDD VVIKKDLTSL 480 WSIDMKGKVI GVVETCGESF HRFDRYLNFS NPVIVKNFDP HACGWAFGMN VFDLAEWRRQ 540 NITEIYHSWQ KLNQDRLLWK LGTLPPGLIT FWNKTLPLNR SWHVLGLGYN PHVSSRDIER 600 AAVIHYNGNM KPWLEIGLPK FRNYWSAYLD YDQPFLRECN INP* 660 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02829 | PLN02829 | 0 | 25 | 643 | 630 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 0 | 186 | 642 | 461 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02718 | PLN02718 | 0 | 56 | 641 | 593 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 0 | 190 | 641 | 458 | + Probable galacturonosyltransferase | ||
PLN02523 | PLN02523 | 0 | 238 | 643 | 412 | + galacturonosyltransferase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005623 | cell |
GO:0005975 | carbohydrate metabolic process |
GO:0009058 | biosynthetic process |
GO:0016740 | transferase activity |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN31213.1 | 0 | 28 | 643 | 29 | 649 | unknown [Zea mays] |
GenBank | EEC83380.1 | 0 | 20 | 619 | 20 | 619 | hypothetical protein OsI_28795 [Oryza sativa Indica Group] |
GenBank | EEC83383.1 | 0 | 34 | 643 | 3 | 621 | hypothetical protein OsI_28798 [Oryza sativa Indica Group] |
RefSeq | NP_001061555.1 | 0 | 20 | 643 | 20 | 643 | Os08g0327100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002444200.1 | 0 | 28 | 643 | 28 | 648 | hypothetical protein SORBIDRAFT_07g014890 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.00003 | 440 | 613 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.0001 | 440 | 613 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.0001 | 440 | 613 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |