| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os08g43570.1 |
| Family | GH35 |
| Protein Properties | Length: 849 Molecular Weight: 94739.2 Isoelectric Point: 9.2742 |
| Chromosome | Chromosome/Scaffold: 8 Start: 27560627 End: 27565221 |
| Description | glycosyl hydrolase family 35 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 40 | 344 | 0 |
| LIIDGHREIFFSGSIHYPRSPPDTWPDLISKAKEGGLNVIESYVFWNGHEPEQGVYNFEGRYDLIKFFKLIQEKEMYAIVRIGPFVQAEWNHGGLPYWLR EIPDIIFRTNNEPFKKYMKQFVTLIVNKLKEAKLFASQGGPIILAQIENEYQHLEVAFKEAGTKYINWAAKMAIATNTGVPWIMCKQTKAPGEVIPTCNG RHCGDTWPGPADKKKPLLWTENWTAQYRVFGDPPSQRSAEDIAFSVARFFSVGGTMANYYMYHGGTNFGRNGAAFVMPRYYDEAPLDEFGLYKEPKWGHL RDLHH | |||
| Full Sequence |
|---|
| Protein Sequence Length: 849 Download |
| MSAAAVLAVV AAAVAALAAA ASGYELTKNG TVITYDRRSL IIDGHREIFF SGSIHYPRSP 60 PDTWPDLISK AKEGGLNVIE SYVFWNGHEP EQGVYNFEGR YDLIKFFKLI QEKEMYAIVR 120 IGPFVQAEWN HGGLPYWLRE IPDIIFRTNN EPFKKYMKQF VTLIVNKLKE AKLFASQGGP 180 IILAQIENEY QHLEVAFKEA GTKYINWAAK MAIATNTGVP WIMCKQTKAP GEVIPTCNGR 240 HCGDTWPGPA DKKKPLLWTE NWTAQYRVFG DPPSQRSAED IAFSVARFFS VGGTMANYYM 300 YHGGTNFGRN GAAFVMPRYY DEAPLDEFGL YKEPKWGHLR DLHHALRHCK KALLWGNPSV 360 QPLGKLYEAR VFEMKEKNVC VAFLSNHNTK EDGTVTFRGQ KYFVARRSIS ILADCKTVVF 420 STQHVNSQHN QRTFHFADQT VQDNVWEMYS EEKIPRYSKT SIRTQRPLEQ YNQTKDKTDY 480 LWYTTSFRLE TDDLPYRKEV KPVLEVSSHG HAIVAFVNDA FVGCGHGTKI NKAFTMEKAM 540 DLKVGVNHVA ILSSTLGLMD SGSYLEHRMA GVYTVTIRGL NTGTLDLTTN GWGHVVGLDG 600 ERRRVHSEQG MGAVAWKPGK DNQPLTWYRR RFDPPSGTDP VVIDLTPMGK GFLFVNGEGL 660 GRYWVSYHHA LGKPSQYLYH VPRSLLRPKG NTLMFFEEEG GKPDAIMILT VKRDNICTFM 720 TEKNPAHVRW SWESKDSQPK AVAGAGAGAG GLKPTAVLSC PTKKTIQSVV FASYGNPLGI 780 CGNYTVGSCH APRTKEVVEK ACIGRKTCSL VVSSEVYGGD VHCPGTTGTL AVQAKCSKRP 840 PRSAATAQ* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 2.0e-8 | 60 | 190 | 145 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG1874 | LacA | 3.0e-20 | 33 | 190 | 165 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam02140 | Gal_Lectin | 1.0e-21 | 758 | 836 | 83 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 6.0e-142 | 39 | 346 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 33 | 837 | 830 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACL54349.1 | 0 | 24 | 844 | 34 | 849 | unknown [Zea mays] |
| GenBank | EEC83995.1 | 0 | 155 | 848 | 424 | 1078 | hypothetical protein OsI_30162 [Oryza sativa Indica Group] |
| GenBank | EEE69115.1 | 0 | 25 | 848 | 25 | 848 | hypothetical protein OsJ_28192 [Oryza sativa Japonica Group] |
| RefSeq | NP_001062440.1 | 0 | 25 | 848 | 25 | 848 | Os08g0549200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002445734.1 | 0 | 27 | 845 | 32 | 843 | hypothetical protein SORBIDRAFT_07g024870 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 3e-38 | 37 | 342 | 12 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 4e-36 | 33 | 342 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 4e-36 | 33 | 342 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
