| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os09g09980.1 |
| Family | CBM43 |
| Protein Properties | Length: 489 Molecular Weight: 52236.6 Isoelectric Point: 5.1764 |
| Chromosome | Chromosome/Scaffold: 9 Start: 5430895 End: 5433234 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM43 | 365 | 444 | 8.1e-27 |
| WCIANPAQNLDNVANHLKLACSMADCTTLDYGGSCYGIGEKANVSYAFNSYYQQQKQDAKSCDFDGNGMITYLDPSMGEC | |||
| GH17 | 25 | 344 | 0 |
| VGVNWGTLSSHRVPPPVVVDLLRANRIGKVKLFDADPAVLRALAGSGLQVMVGVTNAELAAVAGSPAAADAWVAQNVSRYVGRGGVDIRYIAVGNEPFLT SYQGQFQSYVIPAMTNIQQSLVKANLASYVKLVVPCNADAYQSASLPSQGVFRTELTQIMTQLAAFLSSSGAPFVVNIYPFLSLYQSSDFPQDYAFFEGS THPVVDGPNTYYNAFDGNFDTLVAALGKIGYGQLPIAIGEVGWPTEGAPSANLTAARAFNQGLMNRVMNNKGTPLRPGVPPADVYLFSLFDEEQKSILPG NFERHWGIFSFDGQAKYPLN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 489 Download |
| MGAFAAALLA LLLAAMAAPP AEAAVGVNWG TLSSHRVPPP VVVDLLRANR IGKVKLFDAD 60 PAVLRALAGS GLQVMVGVTN AELAAVAGSP AAADAWVAQN VSRYVGRGGV DIRYIAVGNE 120 PFLTSYQGQF QSYVIPAMTN IQQSLVKANL ASYVKLVVPC NADAYQSASL PSQGVFRTEL 180 TQIMTQLAAF LSSSGAPFVV NIYPFLSLYQ SSDFPQDYAF FEGSTHPVVD GPNTYYNAFD 240 GNFDTLVAAL GKIGYGQLPI AIGEVGWPTE GAPSANLTAA RAFNQGLMNR VMNNKGTPLR 300 PGVPPADVYL FSLFDEEQKS ILPGNFERHW GIFSFDGQAK YPLNLGLGNP VLKNAREVPY 360 LPSRWCIANP AQNLDNVANH LKLACSMADC TTLDYGGSCY GIGEKANVSY AFNSYYQQQK 420 QDAKSCDFDG NGMITYLDPS MGECRFLVGI DDSKSSAVSS CGCGCGVCCG VWVLFFWVFM 480 YLRMMGSV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 5.0e-5 | 172 | 336 | 188 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 5.0e-18 | 364 | 433 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 5.0e-31 | 365 | 446 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 6.0e-69 | 25 | 344 | 321 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005623 | cell |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ06546.1 | 0 | 25 | 462 | 36 | 473 | hypothetical protein OsI_28792 [Oryza sativa Indica Group] |
| GenBank | EEC84224.1 | 0 | 1 | 488 | 1 | 488 | hypothetical protein OsI_30642 [Oryza sativa Indica Group] |
| RefSeq | NP_001062739.1 | 0 | 22 | 488 | 22 | 488 | Os09g0272300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001141759.1 | 0 | 21 | 487 | 24 | 491 | hypothetical protein LOC100273895 [Zea mays] |
| RefSeq | XP_002459936.1 | 0 | 21 | 487 | 24 | 491 | hypothetical protein SORBIDRAFT_02g017290 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ur8_B | 0 | 25 | 348 | 3 | 317 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 3ur8_A | 0 | 25 | 348 | 3 | 317 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 3ur7_B | 0 | 25 | 348 | 3 | 317 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 25 | 348 | 3 | 317 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 2cyg_A | 0 | 25 | 345 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
