| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os09g32550.2 |
| Family | CBM43 |
| Protein Properties | Length: 478 Molecular Weight: 51123 Isoelectric Point: 8.1769 |
| Chromosome | Chromosome/Scaffold: 9 Start: 19433703 End: 19437709 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 384 | 471 | 7.3e-30 |
| WCVLAGRRGEKLNETAVGDALAYACGQGNGTCDAIQPGGECFRPNTTAAHASYAFNSYWQQLRKTGATCYFNNLAEETTKDPSHGSCK | |||
| GH17 | 31 | 357 | 0 |
| IGVNYGRVADDIPPPARSVELLRAVGAGSVKIYDANSSVLRALAGTRMRVSIMVPNEIIPGLAASAAAADRWVAENLVPYYPETRVKYLLVGNELLSDYS IANSTWPRIVPAMENLHVSLRRRRISSVKISTTLAMDALTSGSFPRPPSAAAFRPDIAGDVVRPLLRFLNGTNSYYFVDAYPYFVWAGNNDTVPLEYALF QGGGGGGRYVDPGTGLTYTNMLDEMLDAVVHAMAKLGYGGVKLGIAETGWPNGGDYEQIGCNAHNAAIYNRNLAARMARSPGTPARPGAKMPVFVFSLYN EDLKPGPGTERHWGLYYANGTAVYPVD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 478 Download |
| MASMAALLVV VFLAGCHVVA QGRSTAAAHG IGVNYGRVAD DIPPPARSVE LLRAVGAGSV 60 KIYDANSSVL RALAGTRMRV SIMVPNEIIP GLAASAAAAD RWVAENLVPY YPETRVKYLL 120 VGNELLSDYS IANSTWPRIV PAMENLHVSL RRRRISSVKI STTLAMDALT SGSFPRPPSA 180 AAFRPDIAGD VVRPLLRFLN GTNSYYFVDA YPYFVWAGNN DTVPLEYALF QGGGGGGRYV 240 DPGTGLTYTN MLDEMLDAVV HAMAKLGYGG VKLGIAETGW PNGGDYEQIG CNAHNAAIYN 300 RNLAARMARS PGTPARPGAK MPVFVFSLYN EDLKPGPGTE RHWGLYYANG TAVYPVDLAG 360 ARPLRSYPLL PPPENDAPYK GPVWCVLAGR RGEKLNETAV GDALAYACGQ GNGTCDAIQP 420 GGECFRPNTT AAHASYAFNS YWQQLRKTGA TCYFNNLAEE TTKDPSHGSC KFHSSLD* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.0007 | 275 | 349 | 78 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-17 | 384 | 458 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-34 | 384 | 472 | 89 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 9.0e-86 | 31 | 357 | 328 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005575 | cellular_component |
| GO:0005618 | cell wall |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC84834.1 | 0 | 1 | 477 | 1 | 477 | hypothetical protein OsI_31928 [Oryza sativa Indica Group] |
| RefSeq | NP_001063586.1 | 0 | 1 | 477 | 1 | 480 | Os09g0502200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001149815.1 | 0 | 16 | 475 | 16 | 475 | glucan endo-1,3-beta-glucosidase A6 [Zea mays] |
| RefSeq | XP_002444717.1 | 0 | 6 | 477 | 25 | 484 | hypothetical protein SORBIDRAFT_07g026540 [Sorghum bicolor] |
| RefSeq | XP_002462618.1 | 0 | 31 | 477 | 37 | 481 | hypothetical protein SORBIDRAFT_02g029080 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghr_A | 0 | 31 | 358 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1aq0_B | 0 | 31 | 358 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 31 | 358 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 2cyg_A | 0 | 31 | 358 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 31 | 358 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
