| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os09g39570.1 |
| Family | GH14 |
| Protein Properties | Length: 534 Molecular Weight: 59711.9 Isoelectric Point: 5.8725 |
| Chromosome | Chromosome/Scaffold: 9 Start: 22713280 End: 22717110 |
| Description | beta-amylase 2 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 99 | 516 | 0 |
| YVMLPLGVVNGNGEVVDADVLVGQLRVLKAAGVDGVMVDCWWGNVEAHRPQEYNWTGYKRLFHMIRELKLKLQVVMSFHECGGNVGDDVSIPLPHWVTEI GRSNPDIYFTDRAGRRNTECLSWGIDKERVLQGRTGVEVYFDYMRSFRVEFDEYFEDGIISEIEIGLGACGELRYPSYPAKHGWKYPGIGEFQCYDRYLQ KSLRRAAEARGHTIWARAPDSAGHYNSEPNLTGFFSDGGDYDSYYGRFFLNWYSQVLVDHADRVLMLARLAFEGSDIAVKVSGVHWWYKTASHAAELTAG FYNPCNRDGYASIAAVLKKHGAALNFTCVELRTMDQHEVFPEAFADPEGLVWQVLNAAWDAGIPVASENALPCYDRDGFNKILENAKPLNDPDGRHLLGF TYLRLTKVLFERANFLEF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 534 Download |
| MISSPALFFL LQPGRPSIAA PPLPSSPAPP LRGISISPVA ARPISSLRSS SSIRIISPPH 60 ALPDPLLSLP SMDPQEVPDL LPPRPPERDF AGTPYVPVYV MLPLGVVNGN GEVVDADVLV 120 GQLRVLKAAG VDGVMVDCWW GNVEAHRPQE YNWTGYKRLF HMIRELKLKL QVVMSFHECG 180 GNVGDDVSIP LPHWVTEIGR SNPDIYFTDR AGRRNTECLS WGIDKERVLQ GRTGVEVYFD 240 YMRSFRVEFD EYFEDGIISE IEIGLGACGE LRYPSYPAKH GWKYPGIGEF QCYDRYLQKS 300 LRRAAEARGH TIWARAPDSA GHYNSEPNLT GFFSDGGDYD SYYGRFFLNW YSQVLVDHAD 360 RVLMLARLAF EGSDIAVKVS GVHWWYKTAS HAAELTAGFY NPCNRDGYAS IAAVLKKHGA 420 ALNFTCVELR TMDQHEVFPE AFADPEGLVW QVLNAAWDAG IPVASENALP CYDRDGFNKI 480 LENAKPLNDP DGRHLLGFTY LRLTKVLFER ANFLEFERFV KRMHGEAVLD LQV* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00197 | PLN00197 | 4.0e-153 | 96 | 523 | 436 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 2.0e-170 | 96 | 523 | 432 | + beta-amylase | ||
| PLN02905 | PLN02905 | 0 | 90 | 533 | 444 | + beta-amylase | ||
| PLN02705 | PLN02705 | 0 | 90 | 526 | 438 | + beta-amylase | ||
| PLN02801 | PLN02801 | 0 | 95 | 526 | 438 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0009056 | catabolic process |
| GO:0009536 | plastid |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG29023.1 | 0 | 5 | 533 | 9 | 567 | beta-amylase [Zea mays] |
| GenBank | EEC85090.1 | 0 | 11 | 533 | 129 | 651 | hypothetical protein OsI_32458 [Oryza sativa Indica Group] |
| GenBank | EEE70265.1 | 0 | 11 | 533 | 128 | 650 | hypothetical protein OsJ_30408 [Oryza sativa Japonica Group] |
| RefSeq | NP_001063976.1 | 0 | 1 | 533 | 1 | 533 | Os09g0569200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002459849.1 | 0 | 75 | 533 | 12 | 469 | hypothetical protein SORBIDRAFT_02g012320 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1btc_A | 0 | 95 | 526 | 7 | 440 | A Chain A, Three-Dimensional Structure Of Soybean Beta-Amylase Determined At 3.0 Angstroms Resolution: Preliminary Chain Tracing Of The Complex With Alpha-Cyclodext |
| PDB | 1byd_A | 0 | 95 | 526 | 11 | 444 | A Chain A, Three-Dimensional Structure Of Soybean Beta-Amylase Determined At 3.0 Angstroms Resolution: Preliminary Chain Tracing Of The Complex With Alpha-Cyclodext |
| PDB | 1byc_A | 0 | 95 | 526 | 11 | 444 | A Chain A, Three-Dimensional Structure Of Soybean Beta-Amylase Determined At 3.0 Angstroms Resolution: Preliminary Chain Tracing Of The Complex With Alpha-Cyclodext |
| PDB | 1byb_A | 0 | 95 | 526 | 11 | 444 | A Chain A, Three-Dimensional Structure Of Soybean Beta-Amylase Determined At 3.0 Angstroms Resolution: Preliminary Chain Tracing Of The Complex With Alpha-Cyclodext |
| PDB | 1bya_A | 0 | 95 | 526 | 11 | 444 | A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With Beta-Maltose And Maltal: Active Site Components And Their Apparent Role In Catalysis |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DV021150 | 292 | 181 | 472 | 0 |
| CO447286 | 289 | 173 | 461 | 0 |
| FF359578 | 263 | 135 | 397 | 0 |
| JG814958 | 249 | 127 | 375 | 0 |
| EG377480 | 254 | 112 | 365 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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