| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os09g39760.1 |
| Family | CE8 |
| Protein Properties | Length: 409 Molecular Weight: 44010.3 Isoelectric Point: 7.4363 |
| Chromosome | Chromosome/Scaffold: 9 Start: 22804668 End: 22807049 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 96 | 387 | 0 |
| AAGCANFTTIQKAVDAVPDYAATRTLIAVDAGIYREKVVVWSNKTALTLHGRGNLNTTVAWNATSNSTGGSTVYSATFTVLAPAFVAYNITFQNTSPPPE PGDAGGQAVALRVAGDEAAFHWCGVYSAQDTLLDESGRHLFRGCYIEGSIDFIFGNARSLYVGCTISSVAMASATGNKEVTGSVTAQGRASAAERTGFAF VRCSVVGTGQVWLGRAWGPYATVVFAETYLGDVVAAEGWNDWGDPGRRQQVWFAEYACWGPGSATAATGRVSYARQLDQRQAAPFMDVSYID | |||
| Full Sequence |
|---|
| Protein Sequence Length: 409 Download |
| MNKCRSSSSS SNSRALYALL LTSLILTVII LYLPPPPDPL SQSQFEFDQL KLDDHPPPPQ 60 LHRRRTKRCA EHLRWAASLA SQHNATLLLT VDRNQAAGCA NFTTIQKAVD AVPDYAATRT 120 LIAVDAGIYR EKVVVWSNKT ALTLHGRGNL NTTVAWNATS NSTGGSTVYS ATFTVLAPAF 180 VAYNITFQNT SPPPEPGDAG GQAVALRVAG DEAAFHWCGV YSAQDTLLDE SGRHLFRGCY 240 IEGSIDFIFG NARSLYVGCT ISSVAMASAT GNKEVTGSVT AQGRASAAER TGFAFVRCSV 300 VGTGQVWLGR AWGPYATVVF AETYLGDVVA AEGWNDWGDP GRRQQVWFAE YACWGPGSAT 360 AATGRVSYAR QLDQRQAAPF MDVSYIDANQ WALPPSTPEL YGSRYTPS* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02634 | PLN02634 | 1.0e-91 | 87 | 394 | 314 | + probable pectinesterase | ||
| PLN02432 | PLN02432 | 2.0e-93 | 87 | 391 | 305 | + putative pectinesterase | ||
| PLN02665 | PLN02665 | 1.0e-101 | 98 | 395 | 299 | + pectinesterase family protein | ||
| PLN02682 | PLN02682 | 7.0e-117 | 86 | 394 | 314 | + pectinesterase family protein | ||
| PLN02304 | PLN02304 | 3.0e-128 | 84 | 394 | 311 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0005623 | cell |
| GO:0008150 | biological_process |
| GO:0008152 | metabolic process |
| GO:0016787 | hydrolase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI30191.1 | 0 | 64 | 398 | 80 | 406 | unnamed protein product [Vitis vinifera] |
| GenBank | EEC85099.1 | 0 | 28 | 408 | 126 | 506 | hypothetical protein OsI_32473 [Oryza sativa Indica Group] |
| RefSeq | NP_001063991.1 | 0 | 38 | 408 | 38 | 408 | Os09g0571100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002264941.1 | 0 | 85 | 398 | 11 | 316 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002459865.1 | 0 | 69 | 403 | 81 | 409 | hypothetical protein SORBIDRAFT_02g012560 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 9.99967e-42 | 98 | 391 | 11 | 303 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 9.99995e-41 | 96 | 398 | 13 | 314 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_B | 0.000000000000002 | 102 | 380 | 18 | 328 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_A | 0.000000000000002 | 102 | 380 | 18 | 328 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntp_B | 0.000000000000002 | 102 | 380 | 18 | 328 | A Chain A, Pectin Methylesterase From Carrot |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
