| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os10g20650.1 |
| Family | CBM43 |
| Protein Properties | Length: 345 Molecular Weight: 35224.3 Isoelectric Point: 6.4955 |
| Chromosome | Chromosome/Scaffold: 10 Start: 10427659 End: 10431911 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 257 | 339 | 3.3e-32 |
| WCVAKPTVPLDRLQEAMDYACSQDGVDCQEISGGGSCFYPDNIAAHASYAFNSYWQKMKHIGGSCSFGGTAVLINSDPSYLQC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 345 Download |
| MEFLVAQALL LLVVVSNSLL LPSLGLAVSG QEAHEVAMAG LHDQQPPSPA AVAARVSVAQ 60 ADLPMVASSV LGAESWLRAH VLAHYPSNHV TAIAVAVACA RGGSRHGQDL RASRAAKNLH 120 HALVRWGLVD EIKIDASSAP CAEEVGGGAL KRRLYGMHHL PPPLPPTSVA SPPPPGVPLS 180 FAPNAPPEVV PSVPPAAAPP STPVVVVPAP ATSPPMSMPA TPPEAAAGGM APCSAPPTAA 240 MSPQPCSGEG GNGGGQWCVA KPTVPLDRLQ EAMDYACSQD GVDCQEISGG GSCFYPDNIA 300 AHASYAFNSY WQKMKHIGGS CSFGGTAVLI NSDPSYLQCR FMMS* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 2.0e-22 | 256 | 328 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 6.0e-39 | 256 | 341 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005488 | binding |
| GO:0005623 | cell |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK92657.1 | 0 | 1 | 335 | 1 | 335 | AC079634_18 Putative protein with similarity to glucan endo-1,3-beta-glucosidase [Oryza sativa Japonica Group] |
| GenBank | ABG66028.1 | 0 | 1 | 344 | 1 | 342 | expressed protein [Oryza sativa (japonica cultivar-group)] |
| GenBank | EAY78123.1 | 0 | 1 | 335 | 1 | 335 | hypothetical protein OsI_33170 [Oryza sativa Indica Group] |
| GenBank | EAZ15761.1 | 0 | 1 | 261 | 1 | 261 | hypothetical protein OsJ_31180 [Oryza sativa Japonica Group] |
| RefSeq | NP_001064401.1 | 0 | 1 | 344 | 1 | 344 | Os10g0347000 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 5e-20 | 255 | 341 | 11 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
