| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os10g20650.2 |
| Family | CBM43 |
| Protein Properties | Length: 343 Molecular Weight: 35038.1 Isoelectric Point: 6.4955 |
| Chromosome | Chromosome/Scaffold: 10 Start: 10427700 End: 10431911 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 255 | 337 | 3.3e-32 |
| WCVAKPTVPLDRLQEAMDYACSQDGVDCQEISGGGSCFYPDNIAAHASYAFNSYWQKMKHIGGSCSFGGTAVLINSDPSYLQC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 343 Download |
| MEFLVAQALL LLVVVSNSLL LPSLGLAGQE AHEVAMAGLH DQQPPSPAAV AARVSVAQAD 60 LPMVASSVLG AESWLRAHVL AHYPSNHVTA IAVAVACARG GSRHGQDLRA SRAAKNLHHA 120 LVRWGLVDEI KIDASSAPCA EEVGGGALKR RLYGMHHLPP PLPPTSVASP PPPGVPLSFA 180 PNAPPEVVPS VPPAAAPPST PVVVVPAPAT SPPMSMPATP PEAAAGGMAP CSAPPTAAMS 240 PQPCSGEGGN GGGQWCVAKP TVPLDRLQEA MDYACSQDGV DCQEISGGGS CFYPDNIAAH 300 ASYAFNSYWQ KMKHIGGSCS FGGTAVLINS DPSYLQCRFM MS* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 2.0e-22 | 254 | 326 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 6.0e-39 | 254 | 339 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005488 | binding |
| GO:0005623 | cell |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK92657.1 | 0 | 1 | 333 | 1 | 335 | AC079634_18 Putative protein with similarity to glucan endo-1,3-beta-glucosidase [Oryza sativa Japonica Group] |
| GenBank | ABG66028.1 | 0 | 1 | 342 | 1 | 342 | expressed protein [Oryza sativa (japonica cultivar-group)] |
| GenBank | EAY78123.1 | 0 | 1 | 333 | 1 | 335 | hypothetical protein OsI_33170 [Oryza sativa Indica Group] |
| GenBank | EAZ15761.1 | 0 | 1 | 263 | 1 | 265 | hypothetical protein OsJ_31180 [Oryza sativa Japonica Group] |
| RefSeq | NP_001064401.1 | 0 | 1 | 342 | 1 | 344 | Os10g0347000 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 6e-20 | 253 | 339 | 11 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
