CAZyme Information

Basic Information
SpeciesOryza sativa
Cazyme IDLOC_Os10g28050.1
FamilyGH18
Protein PropertiesLength: 308 Molecular Weight: 33679.2 Isoelectric Point: 4.855
ChromosomeChromosome/Scaffold: 10 Start: 14558959 End: 14560336
Description
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH18662216.4e-21
  TTETNPPTPTNGKFNIFWQNTVLTPSAVASIKQSNPNVRVAVSMGGATVNDRPVFFNITSVDSWVNNAVESLTGIIQDNNLDGIDIDYEQFQVDPDTFTE
  CVGRLITVLKAKGVIKFASIAPFGNAEVQRHYMALWAKYGAVIDYINFQFYAYGAS
Full Sequence
Protein Sequence     Length: 308     Download
MGSAKLIAVV LLPALLAFQA PMATAVNSNL FRDYIGAIFN GVKFTDVPIN PKVRFDFILA    60
FIIDYTTETN PPTPTNGKFN IFWQNTVLTP SAVASIKQSN PNVRVAVSMG GATVNDRPVF    120
FNITSVDSWV NNAVESLTGI IQDNNLDGID IDYEQFQVDP DTFTECVGRL ITVLKAKGVI    180
KFASIAPFGN AEVQRHYMAL WAKYGAVIDY INFQFYAYGA STTEAQYVDF FNQQIVNYPG    240
GNILASFTTA ATTTSVPVET ALSACRTLQK EGKLYGIFIW AADHSRSQGF KYETESQALL    300
ANATISY* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd06548GH18_chitinase2.0e-59615459+
smart00636Glyco_183.0e-895232141+
cd00598GH18_chitinase-like7.0e-1091216130+
pfam00704Glyco_hydro_183.0e-1197218128+
cd06544GH18_narbonin1.0e-12130285257+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAO15366.10263071282AF330230_1 chitinase [Oryza sativa Japonica Group]
GenBankACF88258.102130723309unknown [Zea mays]
GenBankEAY78484.1013071307hypothetical protein OsI_33576 [Oryza sativa Indica Group]
RefSeqNP_001064605.1013071307Os10g0416100 [Oryza sativa (japonica cultivar-group)]
RefSeqNP_001152001.102130723309chitinase 2 [Zea mays]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3sim_B0303002273A Chain A, Crystallographic Structure Analysis Of Family 18 Chitinase From Crocus Vernus
PDB3sim_A0303002273A Chain A, Crystallographic Structure Analysis Of Family 18 Chitinase From Crocus Vernus
PDB1nar_A3e-26302854266A Chain A, Crystal Structure Of Narbonin Refined At 1.8 Angstroms Resolution
PDB3qok_A0.000026421967230A Chain A, Crystal Structure Of Putative Chitinase Ii From Klebsiella Pneumoniae
PDB4ac1_X0.0017428056255X Chain X, The Structure Of A Fungal Endo-Beta-N-Acetylglucosaminidase From Glycosyl Hydrolase Family 18, At 1.3a Resolution
Metabolic Pathways
Pathway NameReactionECProtein Name
chitin degradation II3.2.1.14-RXNEC-3.2.1.14chitinase
chitin degradation IIRXN-12623EC-3.2.1.14chitinase
chitin degradation IIRXN-12624EC-3.2.1.14chitinase
chitin degradation III (carnivorous plants)3.2.1.14-RXNEC-3.2.1.14chitinase
Transmembrane Domains
StartEnd
726
Signal Peptide
Cleavage Site
25
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
CT853760278243010
CB629889259242820
EE176053252242750
EE032877250242730
EE176407249242720
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_046_00008.1Aquca_014_00353.1Aquca_010_00636.1Aquca_027_00184.1
Brachypodium distachyonBradi3g26850.1Bradi3g26810.1Bradi3g26840.1
Carica papayaevm.model.supercontig_139.6
Citrus clementinaCiclev10028881mCiclev10003729m
Citrus sinensisorange1.1g021511morange1.1g046094m
Eucalyptus grandisEucgr.B02439.1Eucgr.J02106.1
Fragaria vescamrna14033.1-v1.0-hybrid.59.211mrna14019.1-v1.0-hybridmrna15882.1-v1.0-hybridmrna14034.1-v1.0-hybridmrna17899.1-v1.0-hybrid
mrna22564.1-v1.0-hybrid
Glycine maxGlyma11g15512.1Glyma09g21615.1Glyma13g40590.1
Gossypium raimondiiGorai.003G135700.1Gorai.003G135800.1Gorai.003G134100.1Gorai.003G129600.1Gorai.011G120000.1
Gorai.003G138400.1
Linum usitatissimumLus10005172
Malus domesticaMDP0000904158MDP0000885802MDP0000644797MDP0000312089
Manihot esculentacassava4.1_024209mcassava4.1_027074m
Medicago truncatulaMedtr6g079630.1Medtr2g096030.1
Mimulus guttatusmgv1a019267mmgv1a024804m
Oryza sativaLOC_Os10g28080.1
Panicum virgatumPavirv00061810mPavirv00014582mPavirv00031712m
Phaseolus vulgarisPhvul.011G069900.1
Picea abiesMA_38396g0010MA_10427109g0010
Populus trichocarpaPotri.012G102400.1Potri.015G100500.1Potri.015G100600.1Potri.001G341700.1
Prunus persicappa023801mppa009038mppa009096m
Ricinus communis30039.m00023530039.m000234
Setaria italicaSi022612mSi026720mSi028172mSi036765mSi036774m
Selaginella moellendorffii41118115493
Sorghum bicolorSb01g021920.1
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny