| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os10g30156.1 |
| Family | GT5 |
| Protein Properties | Length: 750 Molecular Weight: 83312.3 Isoelectric Point: 5.9616 |
| Chromosome | Chromosome/Scaffold: 10 Start: 15673128 End: 15681124 |
| Description | starch synthase 2 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 259 | 742 | 0 |
| NIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVVPMYKNYAEPQQLGEPRRYQVAGQDMEVIYYHAYIDGVDFVFIDNPIFHHVENDIYGGDRT DILKRMVLLCKAAIEVPWYVPCGGYCYGDGNLVFLANDWHTALLPVYLKAYYHDNGFMIYARSVLVIHNIAHQGRGPLDDFSYLDLPVDYMDLFKLYDPF GGDHLNIFAAGIKAADRLLTVSHGYAWELKTAEGGWGLHGIINESDWKFQGIVNGIDTTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELGLP VRGDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGTGRQDLEDTLRRLESQHYDRVRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAM MYGTVPVVHAVGGLRDTVEHYNPYEESGLGWTFEKAEANRLIDALGHCLNTYRNYRTSWEGLQKRGMMQDLSWDNAAKLYEEVL | |||
| Full Sequence |
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| Protein Sequence Length: 750 Download |
| MAAAAVSSLL APSGSCYSPG CHSCWGPGPG GGRRLPSPRR RPITAAARPT WAVPRRSRLE 60 WGRVEAQNSG ARTSCRAALQ WLSSTARSHV NVGYGSPLVF PGLTKPGSSR CLCVVGMVGN 120 AGNQVGDDSD DGIKVTNEKL RAVIRKSKEV LEIHRNLLEK ISASERKKIT SIIEDSSIYN 180 EQDPFGQRDS SFYHLDEVPD DDEFSYDLQM YLDRRPDQSE VVATQDYEAQ LSQISEMGQS 240 VAEGTSDDPS ASAAVDLINI ILVAAECAPW SKTGGLGDVA GALPKALARR GHRVMVVVPM 300 YKNYAEPQQL GEPRRYQVAG QDMEVIYYHA YIDGVDFVFI DNPIFHHVEN DIYGGDRTDI 360 LKRMVLLCKA AIEVPWYVPC GGYCYGDGNL VFLANDWHTA LLPVYLKAYY HDNGFMIYAR 420 SVLVIHNIAH QGRGPLDDFS YLDLPVDYMD LFKLYDPFGG DHLNIFAAGI KAADRLLTVS 480 HGYAWELKTA EGGWGLHGII NESDWKFQGI VNGIDTTDWN PRCDIHLKSD GYTNYSLETV 540 QAGKQQCKAA LQKELGLPVR GDVPVIAFIG RLDHQKGVDL IAEAMPWIAG QDVQLIMLGT 600 GRQDLEDTLR RLESQHYDRV RGWVGFSIRL AHRMTAGADI LLMPSRFEPC GLNQLYAMMY 660 GTVPVVHAVG GLRDTVEHYN PYEESGLGWT FEKAEANRLI DALGHCLNTY RNYRTSWEGL 720 QKRGMMQDLS WDNAAKLYEE VLLAAKYQW* 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 5.0e-83 | 258 | 746 | 515 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 2.0e-130 | 259 | 740 | 489 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 6.0e-163 | 259 | 742 | 495 | + glycogen synthase; Provisional | ||
| TIGR02095 | glgA | 0 | 258 | 745 | 492 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 259 | 742 | 490 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0006091 | generation of precursor metabolites and energy |
| GO:0008152 | metabolic process |
| GO:0009058 | biosynthetic process |
| GO:0009536 | plastid |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK64284.1 | 0 | 1 | 749 | 1 | 749 | AF383878_1 soluble starch synthase II-1 [Oryza sativa] |
| GenBank | ACY56170.1 | 0 | 1 | 749 | 1 | 749 | soluble starch synthase II-1 [Oryza sativa Japonica Group] |
| GenBank | ACY56176.1 | 0 | 1 | 749 | 1 | 749 | soluble starch synthase II-1 [Oryza sativa Indica Group] |
| GenBank | EEE51014.1 | 0 | 83 | 749 | 47 | 763 | hypothetical protein OsJ_31644 [Oryza sativa Japonica Group] |
| RefSeq | NP_001064678.1 | 0 | 1 | 749 | 1 | 749 | Os10g0437600 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 258 | 743 | 10 | 509 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3vue_A | 0 | 258 | 743 | 10 | 509 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 1rzv_B | 0 | 258 | 738 | 1 | 468 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
| PDB | 1rzv_A | 0 | 258 | 738 | 1 | 468 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
| PDB | 1rzu_B | 0 | 258 | 738 | 1 | 468 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO781048 | 392 | 359 | 750 | 0 |
| HO777841 | 312 | 439 | 750 | 0 |
| HO777841 | 227 | 214 | 440 | 0 |
| CK210330 | 379 | 344 | 722 | 0 |
| HO781048 | 43 | 320 | 362 | 3.2 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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