y
Basic Information | |
---|---|
Species | Oryza sativa |
Cazyme ID | LOC_Os10g32160.1 |
Family | GT47 |
Protein Properties | Length: 592 Molecular Weight: 65366 Isoelectric Point: 8.0301 |
Chromosome | Chromosome/Scaffold: 10 Start: 16892830 End: 16894805 |
Description | Exostosin family protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT47 | 158 | 499 | 0 |
CGGRYVYVQELPPRFNTDMVKNCVALFPWKDMCKFTANGGFGPPMSGGGGMFQETGWYNSDKYTVDIIFHERMRRYECLTDDPSLAAAVYVPFFAGLEVW RHLWGFNATARDAMALEVVDIITSRPEWRAMGGRDHFFTAGLITWDFRRLADGDAGWGSKLFSLPAIKNMTALVVEASPWHLNDAAIPFPTAFHPASDEA VFVWQDKVRRLERPWLFSFAGAARPGSAKSIRSELITQCRASSACSLMECRDGPSNKCGSAASYMRLFQSSTFCLQPQGDSYTRKSAFDAMLAGCIPVFF HPGTAYVQYTWHLPRNHADYSVYISEDDVRRNASIEERLRRI |
Full Sequence |
---|
Protein Sequence Length: 592 Download |
MKRHNAAEVP VPVSYGGERD EKTGSKVDKM GGGAARRWRS GGCCSRLWLV LVVFATVTML 60 LRHRYDSGLG HGAAAVVRIE PVHRKVKPAD RGGARPSFSD SGSAKPVTVD HKSATTDSST 120 GTESDGGGEP SSASSSLPAA AHPFSRALAA AGDKGDRCGG RYVYVQELPP RFNTDMVKNC 180 VALFPWKDMC KFTANGGFGP PMSGGGGMFQ ETGWYNSDKY TVDIIFHERM RRYECLTDDP 240 SLAAAVYVPF FAGLEVWRHL WGFNATARDA MALEVVDIIT SRPEWRAMGG RDHFFTAGLI 300 TWDFRRLADG DAGWGSKLFS LPAIKNMTAL VVEASPWHLN DAAIPFPTAF HPASDEAVFV 360 WQDKVRRLER PWLFSFAGAA RPGSAKSIRS ELITQCRASS ACSLMECRDG PSNKCGSAAS 420 YMRLFQSSTF CLQPQGDSYT RKSAFDAMLA GCIPVFFHPG TAYVQYTWHL PRNHADYSVY 480 ISEDDVRRNA SIEERLRRIA PAAVERMRET VISLIPTVVY AQPSSRLDTM KDAFDVAVDA 540 IVDKVTRLRR DIVDGRGEEE KLEMYSWKYP LLREGQKVED PHEWDSLFAF A* 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-65 | 157 | 499 | 360 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0003824 | catalytic activity |
GO:0005794 | Golgi apparatus |
GO:0005975 | carbohydrate metabolic process |
GO:0007165 | signal transduction |
GO:0008152 | metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM93699.1 | 0 | 43 | 590 | 14 | 597 | hypothetical protein [Oryza sativa Japonica Group] |
GenBank | EEC67107.1 | 0 | 1 | 590 | 1 | 616 | hypothetical protein OsI_33904 [Oryza sativa Indica Group] |
GenBank | EEE51089.1 | 0 | 1 | 590 | 1 | 585 | hypothetical protein OsJ_31792 [Oryza sativa Japonica Group] |
RefSeq | NP_001064770.1 | 0 | 1 | 591 | 1 | 591 | Os10g0459600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001064771.1 | 0 | 1 | 590 | 1 | 619 | Os10g0459700 [Oryza sativa (japonica cultivar-group)] |