| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os10g32810.1 |
| Family | GH14 |
| Protein Properties | Length: 536 Molecular Weight: 57952.4 Isoelectric Point: 7.1911 |
| Chromosome | Chromosome/Scaffold: 10 Start: 17180757 End: 17183465 |
| Description | beta-amylase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH14 | 76 | 494 | 0 |
| FVMMPLDTVSKCGSALNRRKAVAASLAALKSAGVEGIMVDVWWGIVESEGPGRYNFDGYVELMEMARKTGLKVQAVMSFHQCGGNVGDSVNIPLPRWVVE EMEKDNDLAYTDQWGRRNFEYISLGCDAMPVFKGRTPVECYTDFMRAFRDHFASFLGDTIVEIQVGMGPAGELRYPSYPESNGTWRFPGIGAFQCNDRYM RSSLKAAAEARGKPEWGHGGPTDAGGYNNWPEDTVFFRGDCGGWSTEYGEFFLSWYSQMLLEHGERVLSGATSVFGDGAGAKISVKVAGIHWHYGTRSHA PELTAGYYNTRHRDGYLPIARMLARHGAVLNFTCVEMRDHEQPQEAQCMPEALVRQVAAAARAAGVGLAGENALPRYDGTAHDQVVAAAADRAAEDRMVA FTYLRMGPDLFHPDNWRRF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 536 Download |
| MALNLAQSAA AAACFATAGD ARRAASVVAM PSSSSSATTS LRMKRQAACE PVACRAVARH 60 VAAAAASSRR NGVPVFVMMP LDTVSKCGSA LNRRKAVAAS LAALKSAGVE GIMVDVWWGI 120 VESEGPGRYN FDGYVELMEM ARKTGLKVQA VMSFHQCGGN VGDSVNIPLP RWVVEEMEKD 180 NDLAYTDQWG RRNFEYISLG CDAMPVFKGR TPVECYTDFM RAFRDHFASF LGDTIVEIQV 240 GMGPAGELRY PSYPESNGTW RFPGIGAFQC NDRYMRSSLK AAAEARGKPE WGHGGPTDAG 300 GYNNWPEDTV FFRGDCGGWS TEYGEFFLSW YSQMLLEHGE RVLSGATSVF GDGAGAKISV 360 KVAGIHWHYG TRSHAPELTA GYYNTRHRDG YLPIARMLAR HGAVLNFTCV EMRDHEQPQE 420 AQCMPEALVR QVAAAARAAG VGLAGENALP RYDGTAHDQV VAAAADRAAE DRMVAFTYLR 480 MGPDLFHPDN WRRFVAFVRR MSESGSPREA AESAAHGVAQ ATGSLVHEAA VALRS* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01373 | Glyco_hydro_14 | 5.0e-115 | 76 | 497 | 432 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
| PLN02905 | PLN02905 | 1.0e-122 | 73 | 501 | 436 | + beta-amylase | ||
| PLN02801 | PLN02801 | 7.0e-160 | 71 | 501 | 438 | + beta-amylase | ||
| PLN00197 | PLN00197 | 0 | 72 | 533 | 469 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 0 | 72 | 517 | 446 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0005634 | nucleus |
| GO:0005829 | cytosol |
| GO:0005975 | carbohydrate metabolic process |
| GO:0006950 | response to stress |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY78842.1 | 0 | 19 | 535 | 19 | 536 | hypothetical protein OsI_33946 [Oryza sativa Indica Group] |
| GenBank | EAZ16360.1 | 0 | 19 | 535 | 19 | 535 | hypothetical protein OsJ_31822 [Oryza sativa Japonica Group] |
| RefSeq | NP_001064798.1 | 0 | 1 | 535 | 1 | 535 | Os10g0465700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001147532.1 | 0 | 1 | 535 | 1 | 544 | beta-amylase [Zea mays] |
| RefSeq | XP_002467119.1 | 0 | 1 | 535 | 1 | 547 | hypothetical protein SORBIDRAFT_01g019850 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wdp_A | 0 | 62 | 501 | 1 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1q6c_A | 0 | 62 | 501 | 1 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1bfn_A | 0 | 62 | 501 | 1 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1ukp_D | 0 | 62 | 501 | 1 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_C | 0 | 62 | 501 | 1 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| HO779314 | 408 | 133 | 533 | 0 |
| HO826564 | 403 | 130 | 529 | 0 |
| BU103692 | 435 | 72 | 506 | 0 |
| CX109023 | 136 | 187 | 322 | 0 |
| CX109023 | 150 | 41 | 190 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
