| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os10g33420.1 |
| Family | GH116 |
| Protein Properties | Length: 955 Molecular Weight: 107089 Isoelectric Point: 7.3955 |
| Chromosome | Chromosome/Scaffold: 10 Start: 17584939 End: 17592299 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH116 | 537 | 899 | 0 |
| GKFLYLEGVEYIMWCTYDVHFYASFALLDLFPKIELSIQRDFANAVLYEDRRRMKFLADGTSGIRKVKGAVPHDLGTHDPWHEMNAYNIHDTSKWKDLNP KFVLQVYRDFAATGDMSFGRDVWPAVCAVMDYMNQFDRDGDGLIENDGFPDQTYDAWTVHGISAYCGGLWLAALQAAATMAHRLGDRPFAEKYKLKFIQA KAVYEAKLWNGSYFNYDSGTSSNSRSIQADQLAGQWYAASSGLPPLFDENKIRSALQKIFEFNVMKVKGGRLGAVNGMTPNGKVDETCMQSREIWTGVTY GVAANMLLHGMEHQGFTTAEGIFIAGWSEEGYGYWFQTPEGWTIDGHYRSLIYMRPLAIWAMQ | |||
| Full Sequence |
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| Protein Sequence Length: 955 Download |
| MVSGNLFHCR RNSWPAEEYV GRTALQLLDF DGGSPPEQAW RRRLNSHANL LKEFSVTFME 60 AMRMMSLGLR LWSYVREEAS HGRKAPIDPF TKEKCKPSAS QGVPLGGMGS GSISRGFRGE 120 FKNWHIIPGL CETSPIFVSR DGGNKKYSSV LSPGHHEGLK KCNDSGISSW DWNLSGQHST 180 YHALFPRAWT VYDGEPDPDL KISCRQISPF IPHDYKDSSL PTSVFVYTLV NTGKDRAKVS 240 LLMTWANSIG GFSHHSGGHF NEPFITAKDN PPVTFAIAAC ETQNVNVTVL PVFGLSGEGH 300 DSAKQMWDRM KQNGHFDREN FEAGTSMPSS SGETLCAAVS ASTWVEPHGR CTVVFGLAWS 360 SPKIKFQKGC TYNRRYTEFY GTSERSAVNL VHDALTKYRI WEEEIEKWQN PILKNEKLPE 420 WYKFTLFNEL YFLVAGGTVW TDGQPPVIDE KPSPGSNQQK SSKRGTRDTK QESVKDNHVK 480 LTAEQVTNGG DLANGEEQSV SKYAAVHGPQ MAKATNGLGS QEPIPYLLSK NGPENVGKFL 540 YLEGVEYIMW CTYDVHFYAS FALLDLFPKI ELSIQRDFAN AVLYEDRRRM KFLADGTSGI 600 RKVKGAVPHD LGTHDPWHEM NAYNIHDTSK WKDLNPKFVL QVYRDFAATG DMSFGRDVWP 660 AVCAVMDYMN QFDRDGDGLI ENDGFPDQTY DAWTVHGISA YCGGLWLAAL QAAATMAHRL 720 GDRPFAEKYK LKFIQAKAVY EAKLWNGSYF NYDSGTSSNS RSIQADQLAG QWYAASSGLP 780 PLFDENKIRS ALQKIFEFNV MKVKGGRLGA VNGMTPNGKV DETCMQSREI WTGVTYGVAA 840 NMLLHGMEHQ GFTTAEGIFI AGWSEEGYGY WFQTPEGWTI DGHYRSLIYM RPLAIWAMQW 900 ARSPPKAILD APKVNLMDRI HLSPQMIRAM NEINVRKIAP DNRCFPSSAF RCEC* 960 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3408 | GDB1 | 0.0004 | 605 | 694 | 99 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
| COG4354 | COG4354 | 2.0e-26 | 102 | 442 | 360 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 3.0e-52 | 102 | 401 | 333 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 1.0e-70 | 526 | 898 | 395 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 9.0e-165 | 537 | 900 | 368 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004348 | glucosylceramidase activity |
| GO:0005886 | plasma membrane |
| GO:0006629 | lipid metabolic process |
| GO:0006665 | sphingolipid metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL31035.1 | 0 | 1 | 954 | 1 | 967 | AC078948_19 unknown protein [Oryza sativa Japonica Group] |
| GenBank | EEC67156.1 | 0 | 1 | 954 | 1 | 974 | hypothetical protein OsI_34005 [Oryza sativa Indica Group] |
| GenBank | EEE51125.1 | 0 | 1 | 954 | 1 | 935 | hypothetical protein OsJ_31868 [Oryza sativa Japonica Group] |
| RefSeq | NP_001064833.1 | 0 | 1 | 954 | 1 | 974 | Os10g0473400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002285674.1 | 0 | 1 | 954 | 1 | 978 | PREDICTED: similar to catalytic [Vitis vinifera] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GT045992 | 339 | 603 | 941 | 0 |
| GO856558 | 338 | 611 | 948 | 0 |
| GO868913 | 332 | 521 | 852 | 0 |
| JG941203 | 301 | 553 | 853 | 0 |
| HO779860 | 279 | 679 | 955 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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