| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os10g38050.1 |
| Family | AA3 |
| Protein Properties | Length: 587 Molecular Weight: 63615.1 Isoelectric Point: 6.795 |
| Chromosome | Chromosome/Scaffold: 10 Start: 20377195 End: 20380235 |
| Description | Glucose-methanol-choline (GMC) oxidoreductase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA3 | 42 | 585 | 0 |
| VRHAQDAPLVSSYNYIVIGGGTAGCPLAATLSEHSRVLLLERGGLPYANMSSEQHFTDALADTSPASPAQRFISEDGVVNARARVLGGGSCLNAGFYTRA SNEYVRASGWDARLVNSSYRWVERSLVFRPDVPPWQAALRDALLEVGVTPDNGFTFDHVTGTKIGGTIFDNSGQRHTAADFLRHARPRGLTVLLYATVSR ILFKSQDGVPYPVAYGVVFSDPLGVQHRVYLRDGDKNEVIVSAGTLGSPQLLMLSGVGPQAHLEAHGIEVIVDQPMVGQGVADNPMNSVFIPSPVPVELS LVQVVGITRSGSFIEGVSGSEFGMPVSDGALRWARSFGMLSPQTGQLGTLPPKQRTPEALQRAAEAMMRLDRRAFRGGFILEKILGPVSSGHVELRTTDP RANPSVTFNYFREAEDLERCVHGIETIERVIQSRAFSNFTYANASVESIFTDSANFPVNLLPRHVNDSRSPEQYCMDTVMTIWHYHGGCHVGAVVDDDYR VFGVQGLRVIDSSTFKYSPGTNPQATVMMLGRYMGVKIQSERWK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 587 Download |
| MAALGRASSS APVLAAAAAV LLSLCLAALS EEQEQLENLR FVRHAQDAPL VSSYNYIVIG 60 GGTAGCPLAA TLSEHSRVLL LERGGLPYAN MSSEQHFTDA LADTSPASPA QRFISEDGVV 120 NARARVLGGG SCLNAGFYTR ASNEYVRASG WDARLVNSSY RWVERSLVFR PDVPPWQAAL 180 RDALLEVGVT PDNGFTFDHV TGTKIGGTIF DNSGQRHTAA DFLRHARPRG LTVLLYATVS 240 RILFKSQDGV PYPVAYGVVF SDPLGVQHRV YLRDGDKNEV IVSAGTLGSP QLLMLSGVGP 300 QAHLEAHGIE VIVDQPMVGQ GVADNPMNSV FIPSPVPVEL SLVQVVGITR SGSFIEGVSG 360 SEFGMPVSDG ALRWARSFGM LSPQTGQLGT LPPKQRTPEA LQRAAEAMMR LDRRAFRGGF 420 ILEKILGPVS SGHVELRTTD PRANPSVTFN YFREAEDLER CVHGIETIER VIQSRAFSNF 480 TYANASVESI FTDSANFPVN LLPRHVNDSR SPEQYCMDTV MTIWHYHGGC HVGAVVDDDY 540 RVFGVQGLRV IDSSTFKYSP GTNPQATVMM LGRYMGVKIQ SERWKK* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK02106 | PRK02106 | 2.0e-14 | 428 | 572 | 150 | + choline dehydrogenase; Validated | ||
| PRK02106 | PRK02106 | 1.0e-29 | 53 | 324 | 324 | + choline dehydrogenase; Validated | ||
| TIGR03970 | Rv0697 | 4.0e-32 | 57 | 572 | 560 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| COG2303 | BetA | 2.0e-44 | 53 | 573 | 575 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| PLN02785 | PLN02785 | 0 | 52 | 583 | 535 | + Protein HOTHEAD | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005488 | binding |
| GO:0005623 | cell |
| GO:0008152 | metabolic process |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF65820.1 | 0 | 1 | 586 | 1 | 589 | AF251031_1 putative mandelonitrile lyase [Oryza sativa] |
| GenBank | ACN28873.1 | 0 | 91 | 586 | 1 | 496 | unknown [Zea mays] |
| GenBank | EAY79265.1 | 0 | 1 | 586 | 1 | 588 | hypothetical protein OsI_34381 [Oryza sativa Indica Group] |
| RefSeq | NP_001065107.1 | 0 | 1 | 586 | 1 | 586 | Os10g0524500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002467623.1 | 0 | 3 | 586 | 2 | 582 | hypothetical protein SORBIDRAFT_01g031110 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ju2_B | 0 | 39 | 583 | 12 | 517 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
| PDB | 1ju2_A | 0 | 39 | 583 | 12 | 517 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
| PDB | 3gdp_B | 0 | 39 | 583 | 12 | 517 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
| PDB | 3gdp_A | 0 | 39 | 583 | 12 | 517 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
| PDB | 3gdn_B | 0 | 39 | 583 | 12 | 517 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| cutin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |
| cutin biosynthesis | RXN-9802 | EC-1.1.1 | 16-hydroxypalmitate dehydrogenase |
| suberin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |
