| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os10g41550.1 |
| Family | GH14 |
| Protein Properties | Length: 545 Molecular Weight: 59145.8 Isoelectric Point: 6.7271 |
| Chromosome | Chromosome/Scaffold: 10 Start: 22324198 End: 22327665 |
| Description | chloroplast beta-amylase |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 85 | 496 | 0 |
| YVMLPLETVGAGGKVARARALAASLAALRSGGVEGVMVDVWWGVVEREGPRRYDWEGYGELVRMVERAGLRLQMVMSFHQCGGNVGDSCNIPLPGWVLEE MKSNPDIVYTDRSGRRNPEYISLGCDTLPVLKGRTPIQVYSDYMRSFRDTFCGYLGNTIVEIQVGLGPCGELRYPSYPEANGTWRFPGIGEFQCYDKYMR ASLQQAAAAAGHEEWGRGGPHDAGEYKQFPEETGFFRRDGTWCTEYGDFFLGWYSGMLLEHGDRVLAAAEAVFRGTGAALSAKVAGIHWHYRTRSHAAEL TAGYYNTRRRDGYAPVAAMLARRGAVLNFTCMEMRDEQQPEHAGCSPEQLVRQVRSAARAARVGLAGENALERYDEAAFAQVVATAASAGLGAFTYLRMN KKLFDGDNWRQF | |||
| Full Sequence |
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| Protein Sequence Length: 545 Download |
| MALTLRSSTS FLSPLDPSSK REDAPPCCVV PMPAPGSGGR LRLARAAPVE HATMEEMASP 60 EAATLLHHGG GGGQGQRRGK GTAVYVMLPL ETVGAGGKVA RARALAASLA ALRSGGVEGV 120 MVDVWWGVVE REGPRRYDWE GYGELVRMVE RAGLRLQMVM SFHQCGGNVG DSCNIPLPGW 180 VLEEMKSNPD IVYTDRSGRR NPEYISLGCD TLPVLKGRTP IQVYSDYMRS FRDTFCGYLG 240 NTIVEIQVGL GPCGELRYPS YPEANGTWRF PGIGEFQCYD KYMRASLQQA AAAAGHEEWG 300 RGGPHDAGEY KQFPEETGFF RRDGTWCTEY GDFFLGWYSG MLLEHGDRVL AAAEAVFRGT 360 GAALSAKVAG IHWHYRTRSH AAELTAGYYN TRRRDGYAPV AAMLARRGAV LNFTCMEMRD 420 EQQPEHAGCS PEQLVRQVRS AARAARVGLA GENALERYDE AAFAQVVATA ASAGLGAFTY 480 LRMNKKLFDG DNWRQFVSFV RAMADGGERA ALPSCDTEQS DLYVGFLEKR AAPEAEAAAA 540 AAVV* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02905 | PLN02905 | 1.0e-129 | 84 | 503 | 430 | + beta-amylase |
| pfam01373 | Glyco_hydro_14 | 2.0e-136 | 85 | 499 | 426 | + Glycosyl hydrolase family 14. This family are beta amylases. |
| PLN02801 | PLN02801 | 6.0e-170 | 84 | 503 | 431 | + beta-amylase |
| PLN02803 | PLN02803 | 0 | 1 | 530 | 539 | + beta-amylase |
| PLN00197 | PLN00197 | 0 | 84 | 506 | 432 | + beta-amylase; Provisional |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0005975 | carbohydrate metabolic process |
| GO:0006950 | response to stress |
| GO:0008152 | metabolic process |
| GO:0009056 | catabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF27255.2 | 0 | 1 | 544 | 1 | 522 | Os10g0565200 [Oryza sativa Japonica Group] |
| GenBank | EAZ17007.1 | 0 | 87 | 492 | 1 | 406 | hypothetical protein OsJ_32492 [Oryza sativa Japonica Group] |
| RefSeq | NP_001065418.1 | 0 | 1 | 544 | 1 | 544 | Os10g0565200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002282871.1 | 0 | 1 | 538 | 1 | 541 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002464915.1 | 0 | 1 | 534 | 1 | 547 | hypothetical protein SORBIDRAFT_01g028700 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wdp_A | 0 | 84 | 513 | 14 | 451 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 1q6c_A | 0 | 84 | 513 | 14 | 451 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1bfn_A | 0 | 84 | 513 | 14 | 451 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1ukp_D | 0 | 84 | 513 | 14 | 451 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_C | 0 | 84 | 513 | 14 | 451 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| BU103692 | 533 | 1 | 528 | 0 |
| HO794833 | 412 | 120 | 528 | 0 |
| HO825836 | 375 | 156 | 527 | 0 |
| DT944111 | 286 | 125 | 410 | 0 |
| HO781538 | 346 | 84 | 429 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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