| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os11g03410.1 |
| Family | GT47 |
| Protein Properties | Length: 477 Molecular Weight: 52842.1 Isoelectric Point: 8.9578 |
| Chromosome | Chromosome/Scaffold: 11 Start: 1288704 End: 1292354 |
| Description | exostosin family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 91 | 413 | 0 |
| SHAAVRVFMYDLPPEFHFGLLGWSPPTDGAADAAMWPDVGSGAAAPRYPGGLNQQHSVEYWLTLDLLSSSSPPCGAAVRVADSRDADVVFVPFFASLSYN RHSRVVPPEKVSRDKGLQERLVRYLMAQPEWKRSGGADHVIVAHHPNSLLHARSVLFPAVFVLSDFGRYHPRVASLEKDVIAPYKHMAKTFVNDSAGFDD RPTLLYFRGAIFRKEGGNIRQELHYMLKDEKDVYFAFGSVQDHGASKASQGMHASKFCLNIAGDTPSSNRLFDAIVSHCVPVIISDDIELPYEDALDYSK FSIFVRSSDAVKKGYLMRLIRGV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 477 Download |
| MPPRARTLLM PLAAATLLVA STIFLFAATG ARWRPADTGL PVPAADFSAA VIESAVTDAA 60 AAKEELSFVD ENGRPDDPAS SSAAAARCDP SHAAVRVFMY DLPPEFHFGL LGWSPPTDGA 120 ADAAMWPDVG SGAAAPRYPG GLNQQHSVEY WLTLDLLSSS SPPCGAAVRV ADSRDADVVF 180 VPFFASLSYN RHSRVVPPEK VSRDKGLQER LVRYLMAQPE WKRSGGADHV IVAHHPNSLL 240 HARSVLFPAV FVLSDFGRYH PRVASLEKDV IAPYKHMAKT FVNDSAGFDD RPTLLYFRGA 300 IFRKEGGNIR QELHYMLKDE KDVYFAFGSV QDHGASKASQ GMHASKFCLN IAGDTPSSNR 360 LFDAIVSHCV PVIISDDIEL PYEDALDYSK FSIFVRSSDA VKKGYLMRLI RGVSKHQWTM 420 MWRRLKEVDK HFEYQYPSQK DDAVQMIWQT LARKVPAIRL KSHRSRRFSR YDRGGK* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 4.0e-47 | 91 | 402 | 322 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005623 | cell |
| GO:0008150 | biological_process |
| GO:0008152 | metabolic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA91286.2 | 0 | 1 | 476 | 1 | 476 | secondary cell wall-related glycosyltransferase family 47, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEC67582.1 | 0 | 1 | 476 | 1 | 483 | hypothetical protein OsI_34941 [Oryza sativa Indica Group] |
| GenBank | EEE52679.1 | 0 | 43 | 474 | 96 | 527 | hypothetical protein OsJ_35064 [Oryza sativa Japonica Group] |
| RefSeq | NP_001066040.1 | 0 | 1 | 474 | 1 | 474 | Os12g0124400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151894.1 | 0 | 32 | 463 | 31 | 476 | secondary cell wall-related glycosyltransferase family 47 [Zea mays] |
