| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os11g03730.3 |
| Family | GH51 |
| Protein Properties | Length: 659 Molecular Weight: 72500.5 Isoelectric Point: 4.8687 |
| Chromosome | Chromosome/Scaffold: 11 Start: 1453594 End: 1460064 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH51 | 180 | 649 | 0 |
| LASTTIPVSGASNWTKLEQKLVAQGTNRTSRLQITTNKKGVVWFDQVSLMPADTYKGHGFRTELISMMLDLKPRFLRFPGGCFVEGEWLRNAFRWRESIG PWEERPGHFGDVWHYWTDDGLGYYEFLQLSEDLGAAPIWVFNNGISHNDEVDTAAIAPFVKDVLDSLEFARGNADSTWGSVRAAMGHPEPFPVKYVAIGN EDCGKKFYRGNYLKFYNAIREAYPDIQMISNCDASSSPLDHPADLYDFHVYTDSKTLFSMKNTFDRSSRNGPKAFVSEYAVWRSDAGRGSLLASLAEAAF LTGLEKNSDVVQMASYAPLFVNNNDQTWNPDAIVFNSWQQYGTPSYWMQTLFGESSGAMFHPVTITSSYSGSLAASAITWQDSENSFLRVKIINFGSDPV SLTISATGLQARVNALGSTATVLTSSNVMDENSFSNPNKVVPVKSQLSNAAEQMQVTLAPHSFSSFDLAL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 659 Download |
| MASRESFMST IFFFLLLFSL GCKCIASELH LHATQTAVLK VDASPQLARQ IPDTLFGIFF 60 EEINHAGAGG IWAELVSNRG FEAGGPHTPS NIDPWSIIGD DSSIFVATDR TSCFSRNTVA 120 LRMEVLCDNC PAGGVGIYNP GFWGMNIEDG KIYNLVMYVK SPETVELTVS LTSSDGSQNL 180 ASTTIPVSGA SNWTKLEQKL VAQGTNRTSR LQITTNKKGV VWFDQVSLMP ADTYKGHGFR 240 TELISMMLDL KPRFLRFPGG CFVEGEWLRN AFRWRESIGP WEERPGHFGD VWHYWTDDGL 300 GYYEFLQLSE DLGAAPIWVF NNGISHNDEV DTAAIAPFVK DVLDSLEFAR GNADSTWGSV 360 RAAMGHPEPF PVKYVAIGNE DCGKKFYRGN YLKFYNAIRE AYPDIQMISN CDASSSPLDH 420 PADLYDFHVY TDSKTLFSMK NTFDRSSRNG PKAFVSEYAV WRSDAGRGSL LASLAEAAFL 480 TGLEKNSDVV QMASYAPLFV NNNDQTWNPD AIVFNSWQQY GTPSYWMQTL FGESSGAMFH 540 PVTITSSYSG SLAASAITWQ DSENSFLRVK IINFGSDPVS LTISATGLQA RVNALGSTAT 600 VLTSSNVMDE NSFSNPNKVV PVKSQLSNAA EQMQVTLAPH SFSSFDLALA QSKLVAEM* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3534 | AbfA | 1.0e-33 | 238 | 643 | 483 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 8.0e-38 | 456 | 641 | 203 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 7.0e-51 | 456 | 641 | 198 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005576 | extracellular region |
| GO:0005618 | cell wall |
| GO:0005773 | vacuole |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC67598.1 | 0 | 1 | 658 | 1 | 658 | hypothetical protein OsI_34967 [Oryza sativa Indica Group] |
| GenBank | EEC68793.1 | 0 | 21 | 658 | 22 | 657 | hypothetical protein OsI_37345 [Oryza sativa Indica Group] |
| GenBank | EEE52698.1 | 0 | 21 | 648 | 23 | 648 | hypothetical protein OsJ_35098 [Oryza sativa Japonica Group] |
| RefSeq | NP_001065660.1 | 0 | 1 | 658 | 1 | 658 | Os11g0131900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001066062.1 | 0 | 21 | 658 | 23 | 660 | Os12g0128700 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 6e-22 | 237 | 649 | 47 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 6e-22 | 237 | 649 | 47 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 6e-22 | 237 | 649 | 47 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 6e-22 | 237 | 649 | 47 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 6e-22 | 237 | 649 | 47 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
