| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os11g18690.1 |
| Family | GH3 |
| Protein Properties | Length: 794 Molecular Weight: 85039.4 Isoelectric Point: 6.7812 |
| Chromosome | Chromosome/Scaffold: 11 Start: 10575509 End: 10582986 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 64 | 337 | 0 |
| AGVARLGVPAYEWWSEGLHGLSIWGRGIRFNGTVRAVTSFPQVILTAAAFDAGLWRRVGEAVGAEARALYNLGQANGLTIWSPNVNIFRDPRWGRGQETP GEDPVTASRYAVAFVTGLQGIGGEASACCKHATAYDLDYWNNVVRYNYDSKDGASTGKSGETSSQVEKKHGPYEKGYFAVTLQDLEDTYNPPFKSCVAEG KATCIMCGYNSINGVPACASSDLLTKKVRQEWGMNGYVASDCDAVATIRDAHHYTLSPEDTVAVSIKVGMDVNC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 794 Download |
| MAAAFRIAAA MAVALVLLLL ILPGQQQQPH RFCDAWLTAE QRAADLVANL TLAEKVSQLG 60 DRAAGVARLG VPAYEWWSEG LHGLSIWGRG IRFNGTVRAV TSFPQVILTA AAFDAGLWRR 120 VGEAVGAEAR ALYNLGQANG LTIWSPNVNI FRDPRWGRGQ ETPGEDPVTA SRYAVAFVTG 180 LQGIGGEASA CCKHATAYDL DYWNNVVRYN YDSKDGASTG KSGETSSQVE KKHGPYEKGY 240 FAVTLQDLED TYNPPFKSCV AEGKATCIMC GYNSINGVPA CASSDLLTKK VRQEWGMNGY 300 VASDCDAVAT IRDAHHYTLS PEDTVAVSIK VGMDVNCGNY TQVHAMAAVQ KGNLTEKDID 360 RALVNLFAVR MRLGHFDGDP RSNAVYGHLG AADVCSPAHK SLALEAAQDG IVLLKNDAGA 420 LPLQPSAVTS LAVIGPNADN LGALHGNYFG PPCETTTPLQ GIKGYLGDRA RFLAGCDSPA 480 CAVAATNEAA ALASSSDHVV LFMGLSQKQE QDGLDRTSLL LPGEQQGLIT AVANAARRPV 540 ILVLLTGGPV DVTFAKDNPK IGAILWAGYP GQAGGLAIAK VLFGDHNPSG RLPVTWYPEE 600 FTKVPMTDMR MRADPATGYP GRSYRFYQGN TVYNFGYGLS YSKFSRRMFS SFSTSNAGNL 660 SLLAGVMARR AGDDGGGMSS YLVKEIGVER CSRLVFPAVV EVQNHGPMDG KHSVLMYLRW 720 PTTSGGRPAR QLIGFRSQHV KVGEKAMVSF EVSPCEHFSW VGEDGERVID GGAHFLMVGD 780 EELETSFGLW RLS* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1472 | BglX | 1.0e-50 | 36 | 469 | 447 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 5.0e-55 | 51 | 369 | 349 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| pfam01915 | Glyco_hydro_3_C | 9.0e-58 | 411 | 639 | 234 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 2.0e-69 | 37 | 754 | 806 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 32 | 786 | 769 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005575 | cellular_component |
| GO:0005576 | extracellular region |
| GO:0005618 | cell wall |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAX92967.1 | 0 | 27 | 793 | 27 | 793 | beta-xylosidase, putative [Oryza sativa Japonica Group] |
| GenBank | AAX92971.1 | 0 | 30 | 787 | 38 | 769 | beta-D-xylosidase [Oryza sativa Japonica Group] |
| DDBJ | BAF28072.2 | 0 | 20 | 793 | 19 | 764 | Os11g0291000 [Oryza sativa Japonica Group] |
| GenBank | EEE51984.1 | 0 | 20 | 793 | 19 | 753 | hypothetical protein OsJ_33664 [Oryza sativa Japonica Group] |
| RefSeq | NP_001067709.1 | 0 | 20 | 793 | 46 | 819 | Os11g0291000 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 101 | 779 | 91 | 722 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
| PDB | 3u48_A | 0 | 101 | 779 | 91 | 722 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
| PDB | 3u4a_B | 0 | 101 | 779 | 91 | 722 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
| PDB | 3u4a_A | 0 | 101 | 779 | 91 | 722 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
| PDB | 2x41_A | 6e-36 | 41 | 779 | 2 | 699 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
