| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os11g18730.1 |
| Family | GH3 |
| Protein Properties | Length: 772 Molecular Weight: 82609.5 Isoelectric Point: 7.048 |
| Chromosome | Chromosome/Scaffold: 11 Start: 10609647 End: 10615875 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 73 | 320 | 0 |
| GVPRLGVPPYKWWSEGLHGLSYWGHGMHFNGAVTAITSFPQVLLTAAAFDDRLWFRIGQAIGTEARALYNLGQAEGLTIWSPNVNIYRDPRWGRGQETPG EDPTTASKYAVAFVKGLQGSTPGTLQTSACCKHATAYDLEEWNGVARYNFNAKVTAQDLADTFNPPFKSCVVDAKASCVMCAYTDINGVPACASSDLLSK TFRGQWGLDGYVSSDCDAVALLRDAQRYAPTPEDTVAVAIKAGLDLNC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 772 Download |
| MAAAAGVLLV LTAAVLLLLV EGGEPPYSCG PRSPSSGYAF CDARLPPARR AADLVSRLTA 60 AEKVAQLGDE AGGVPRLGVP PYKWWSEGLH GLSYWGHGMH FNGAVTAITS FPQVLLTAAA 120 FDDRLWFRIG QAIGTEARAL YNLGQAEGLT IWSPNVNIYR DPRWGRGQET PGEDPTTASK 180 YAVAFVKGLQ GSTPGTLQTS ACCKHATAYD LEEWNGVARY NFNAKVTAQD LADTFNPPFK 240 SCVVDAKASC VMCAYTDING VPACASSDLL SKTFRGQWGL DGYVSSDCDA VALLRDAQRY 300 APTPEDTVAV AIKAGLDLNC GNYTQVHGMA ALQQGKMRES DVDRALTNLF AVRMRLGHFD 360 GDPRSNAAYG HLGAADVCTQ AHRDLALEAA QDGIVLLKND AGALPLDRAT VRSAAVIGPN 420 ANDPAALNGN YFGPPCETTT PLQGVQRYIS SVRFLAGCDS PACGFAATGQ AAALASSSDQ 480 VIMFMGLSQD QEKEGLDRTS LLLPGKQQSL ITAVASAARR PVILVLLTGG PVDVTFAKNN 540 PKIGAILWAG YPGQAGGLAI AKVLFGDHNP SGRLPVTWYP EEFTRIPMTD MRMRADPATG 600 YPGRSYRFYQ GNPVYKFGYG LSYSKFSRRL VAAAKPRRPN RNLLAGVIPK PAGDGGESYH 660 VEEIGEEGCE RLKFPATVEV HNHGPMDGKH SVLVFVRWPN ATAGASRPAR QLVGFSSQHV 720 RAGEKARLTM EINPCEHLSR AREDGTKVID RGSHFLKVGE EDDEWEISFD A* 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1472 | BglX | 6.0e-52 | 59 | 445 | 393 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 2.0e-55 | 71 | 352 | 286 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| pfam01915 | Glyco_hydro_3_C | 9.0e-59 | 394 | 624 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 8.0e-76 | 109 | 734 | 670 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 25 | 769 | 760 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005575 | cellular_component |
| GO:0005576 | extracellular region |
| GO:0005618 | cell wall |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAX92971.1 | 0 | 23 | 771 | 23 | 771 | beta-D-xylosidase [Oryza sativa Japonica Group] |
| GenBank | EAY80660.1 | 0 | 23 | 771 | 23 | 771 | hypothetical protein OsI_35838 [Oryza sativa Indica Group] |
| RefSeq | NP_001067726.1 | 0 | 25 | 771 | 35 | 782 | Os11g0297800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002489304.1 | 0 | 9 | 771 | 1 | 750 | hypothetical protein SORBIDRAFT_0010s007570 [Sorghum bicolor] |
| RefSeq | XP_002489310.1 | 0 | 12 | 771 | 17 | 772 | hypothetical protein SORBIDRAFT_0010s010920 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 109 | 734 | 91 | 698 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3u48_A | 0 | 109 | 734 | 91 | 698 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3u4a_B | 0 | 109 | 734 | 91 | 698 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3u4a_A | 0 | 109 | 734 | 91 | 698 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 2x41_A | 8e-37 | 63 | 627 | 35 | 604 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
