| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os11g19160.1 |
| Family | GH3 |
| Protein Properties | Length: 854 Molecular Weight: 91661.8 Isoelectric Point: 9.1513 |
| Chromosome | Chromosome/Scaffold: 11 Start: 10935382 End: 10939606 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 157 | 405 | 0 |
| GVPRLGIPVYKWWSEALHGLAISGKGIHFGNGPARTATSFPQVIHTAAAFDDGLWFRIGQAIGKEGRAFYNLGQAEGLAMWSPNVNIFRDPRWGRGQETP GEDPATASKYGAAFVKGLQGSSLTNLQTSACCKHITAYDIEEWKGVSRYNFNAKVTPQDLADTYNPPFRSCVVDGKASCIMCAYTLINGVPACASSDLLT KTVRGEWKLDGYTASDCDAVAILHKSEHFTRTAEEAVAVALKAGLDINC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 854 Download |
| MHGVHVSVGS LLSFALRSAL CAEKMSSDRR RNLSSWGDTW LSPIGRSGLY EAGASLTQLT 60 RIASTSSRLL RTLPMAVSTS RRGGGVLAAV VTAVAALAML GGVAWGGNPG FTCGPASAQK 120 GFAFCNAALP AEQRAADLVA RLTTAEKVGQ LGDQAPGVPR LGIPVYKWWS EALHGLAISG 180 KGIHFGNGPA RTATSFPQVI HTAAAFDDGL WFRIGQAIGK EGRAFYNLGQ AEGLAMWSPN 240 VNIFRDPRWG RGQETPGEDP ATASKYGAAF VKGLQGSSLT NLQTSACCKH ITAYDIEEWK 300 GVSRYNFNAK VTPQDLADTY NPPFRSCVVD GKASCIMCAY TLINGVPACA SSDLLTKTVR 360 GEWKLDGYTA SDCDAVAILH KSEHFTRTAE EAVAVALKAG LDINCGVYMQ QNAASALQQG 420 KMTEKDVDKA LKNLFAIRMR LGHFDGDPRG NKLYGRLSAA DVCTPVHKAL ALEAARRGVV 480 LLKNDARLLP LRAPTVASAA VIGHNANDIL ALLGNYYGLP CETTTPFGGI QKYVKSAKFL 540 PGCSSAACDV AATDQATALA KSSDYVFLVM GLSQKQEQEG LDRTSLLLPG KQQALITAVA 600 TASKRPVILI LLTGGPVDIT FAQTNPKIGA ILWAGYPGQA GGQAIADVLF GEFNPSGKLP 660 VTWYPEEFTK FTMTDMRMRP DPATGYPGRS YRFYKGKTVY KFGYGLSYSK FACRIVSGAG 720 NSSSYGKAAL AGLRAATTPE GDAVYRVDEI GDDRCERLRF PVMVEVQNHG PMDGKHTVLM 780 FVRWSSTDGG RPVRQLIGFR NQHLKVGEKK KLKMEISPCE HLSRARVDGE KVIDRGSHFL 840 MVEEDELEIR FQD* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1472 | BglX | 9.0e-52 | 127 | 509 | 390 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 7.0e-60 | 143 | 437 | 325 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| pfam01915 | Glyco_hydro_3_C | 3.0e-61 | 479 | 709 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 3.0e-82 | 110 | 818 | 794 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 108 | 851 | 760 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005575 | cellular_component |
| GO:0005576 | extracellular region |
| GO:0005618 | cell wall |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAX96800.1 | 0 | 1 | 853 | 1 | 853 | Glycosyl hydrolase family 3 C terminal domain, putative [Oryza sativa Japonica Group] |
| GenBank | EAY80685.1 | 0 | 75 | 853 | 1 | 779 | hypothetical protein OsI_35867 [Oryza sativa Indica Group] |
| GenBank | EAZ18142.1 | 0 | 236 | 853 | 1 | 618 | hypothetical protein OsJ_33692 [Oryza sativa Japonica Group] |
| RefSeq | NP_001067725.1 | 0 | 75 | 853 | 1 | 779 | Os11g0297300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001067726.1 | 0 | 124 | 852 | 52 | 781 | Os11g0297800 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 194 | 852 | 91 | 731 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 3u48_A | 0 | 194 | 852 | 91 | 731 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 3u4a_B | 0 | 194 | 852 | 91 | 731 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 3u4a_A | 0 | 194 | 852 | 91 | 731 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2x41_A | 8e-34 | 133 | 842 | 2 | 698 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
