| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os11g36240.1 |
| Family | CE8 |
| Protein Properties | Length: 372 Molecular Weight: 40578 Isoelectric Point: 9.9177 |
| Chromosome | Chromosome/Scaffold: 11 Start: 21335334 End: 21337979 |
| Description | methylesterase PCR A |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 59 | 356 | 0 |
| VTVAKNGSGDYRTIAAALAAAPKSTKKVRSSYTIRIGEGTYIEQLNITRRDVTLFGDGVGKTVITGNRGSLKHGDMPSSATVTASGRGFMARDLTIQNTA GPEGNQSLALRSSSNHTVLYRCELESFQDTLYAENGLQLYLDSVISGTVDFVFGNAKAVFQRCHLLVRRGREGAHNIITAQGRDKPGDDTGFSFQNCSIM AKPNENLTGVETFLGRPWKNHSHVIFMQSFLDGIVHPKGWVEWDKSKHVLETTKTVSYMKFNNTGPGSDTSRRVNWEGFSVVDASKAEEYTVDRFIHG | |||
| Full Sequence |
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| Protein Sequence Length: 372 Download |
| MKNTSLQLPL LLVVAALVCC LPTSGAELPG WAKPRLQRLL RGGARSAAAH GRRSPVVEVT 60 VAKNGSGDYR TIAAALAAAP KSTKKVRSSY TIRIGEGTYI EQLNITRRDV TLFGDGVGKT 120 VITGNRGSLK HGDMPSSATV TASGRGFMAR DLTIQNTAGP EGNQSLALRS SSNHTVLYRC 180 ELESFQDTLY AENGLQLYLD SVISGTVDFV FGNAKAVFQR CHLLVRRGRE GAHNIITAQG 240 RDKPGDDTGF SFQNCSIMAK PNENLTGVET FLGRPWKNHS HVIFMQSFLD GIVHPKGWVE 300 WDKSKHVLET TKTVSYMKFN NTGPGSDTSR RVNWEGFSVV DASKAEEYTV DRFIHGTQWL 360 PNALNYKPGL Y* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02713 | PLN02713 | 4.0e-91 | 58 | 361 | 309 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 7.0e-92 | 58 | 370 | 316 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 1.0e-93 | 59 | 370 | 320 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 1.0e-94 | 55 | 363 | 312 | + pectinesterase | ||
| pfam01095 | Pectinesterase | 4.0e-118 | 59 | 356 | 303 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0008150 | biological_process |
| GO:0008152 | metabolic process |
| GO:0016787 | hydrolase activity |
| GO:0030234 | enzyme regulator activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA94334.1 | 0 | 1 | 371 | 1 | 371 | Pectinesterase family protein [Oryza sativa (japonica cultivar-group)] |
| GenBank | EAY80256.1 | 0 | 59 | 365 | 64 | 372 | hypothetical protein OsI_35428 [Oryza sativa Indica Group] |
| GenBank | EAY81365.1 | 0 | 1 | 371 | 1 | 371 | hypothetical protein OsI_36536 [Oryza sativa Indica Group] |
| GenBank | EEE51795.1 | 0 | 59 | 365 | 64 | 372 | hypothetical protein OsJ_33254 [Oryza sativa Japonica Group] |
| RefSeq | NP_001067418.1 | 0 | 59 | 365 | 64 | 372 | Os11g0192400 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 56 | 371 | 2 | 316 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 59 | 360 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 3uw0_A | 8e-16 | 68 | 276 | 43 | 269 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 1qjv_B | 0.000000000000007 | 69 | 276 | 18 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 0.000000000000007 | 69 | 276 | 18 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Signal Peptide | |||||
|---|---|---|---|---|---|
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| Cleavage Site | |||||
| 26 | |||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| HO777316 | 321 | 59 | 370 | 0 |
| CO475715 | 298 | 59 | 349 | 0 |
| DR100880 | 282 | 83 | 360 | 0 |
| CO483304 | 291 | 56 | 340 | 0 |
| EX334231 | 287 | 92 | 370 | 0 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Oryza sativa | LOC_Os08g12410.1 | ||||
| Panicum virgatum | Pavirv00057340m | ||||
| Setaria italica | Si022417m | Si019968m | Si025266m.144.297 | Si025266m.144.297 | |
| Sorghum bicolor | Sb05g000900.1 | Sb04g037740.1 | |||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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