| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os11g36940.1 |
| Family | CBM43 |
| Protein Properties | Length: 493 Molecular Weight: 52418.8 Isoelectric Point: 7.2806 |
| Chromosome | Chromosome/Scaffold: 11 Start: 21790085 End: 21791579 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 372 | 456 | 1.3e-23 |
| WCVLNPNVTDDDAGRLADNVGYACSHSDCTALGYGCSCGALDARGNASYAFNVYYQAQGQADAACDFQGLAVVTEDDRDVAQGAC | |||
| GH17 | 27 | 349 | 0 |
| LGVNWGTMATHRLPPKVMARLLKDNGFKKVKIFDADATTMSGLAGTGIEAMIAVPNDMLAAVGDYGRAREWVKENVTRYSFDGGVDIRYVAVGNEPFLKA YNGQFDRATVPALRNIQRALDEAGYGKRIKATVPVNADVYDSPASNPVPSAGRFRDDVAGTMADMVRFLNRSGAPLTVNIYPFLSLYGNDDFPLDYAFFD GGPPPRPVVDNGINYTNVFDANFDTLVSALKRIGFGSLPIVIGEVGWPTDGDKHATVPYAQRFYSGLLKRLAARRGTPLRPRARIEVYLFGLMDEDTKSV APGNFERHWGIFTFDGRPKFPLD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 493 Download |
| MAAATVWRCA VVVGVVIMAA AAVVDGLGVN WGTMATHRLP PKVMARLLKD NGFKKVKIFD 60 ADATTMSGLA GTGIEAMIAV PNDMLAAVGD YGRAREWVKE NVTRYSFDGG VDIRYVAVGN 120 EPFLKAYNGQ FDRATVPALR NIQRALDEAG YGKRIKATVP VNADVYDSPA SNPVPSAGRF 180 RDDVAGTMAD MVRFLNRSGA PLTVNIYPFL SLYGNDDFPL DYAFFDGGPP PRPVVDNGIN 240 YTNVFDANFD TLVSALKRIG FGSLPIVIGE VGWPTDGDKH ATVPYAQRFY SGLLKRLAAR 300 RGTPLRPRAR IEVYLFGLMD EDTKSVAPGN FERHWGIFTF DGRPKFPLDL RGAGRPAMPV 360 PAKGVKYLPR RWCVLNPNVT DDDAGRLADN VGYACSHSDC TALGYGCSCG ALDARGNASY 420 AFNVYYQAQG QADAACDFQG LAVVTEDDRD VAQGACNFSV QVAAAALVGA AVAAAAAVAC 480 AAAVVAALLA LV* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 4.0e-5 | 262 | 341 | 80 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 5.0e-21 | 371 | 443 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-28 | 372 | 458 | 89 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-72 | 27 | 349 | 325 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005575 | cellular_component |
| GO:0005886 | plasma membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA94484.1 | 0 | 1 | 458 | 1 | 458 | Glucan endo-1,3-beta-glucosidase 5 precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EAY81406.1 | 0 | 30 | 474 | 32 | 476 | hypothetical protein OsI_36575 [Oryza sativa Indica Group] |
| GenBank | EAZ18823.1 | 0 | 1 | 458 | 1 | 458 | hypothetical protein OsJ_34360 [Oryza sativa Japonica Group] |
| RefSeq | NP_001068140.1 | 0 | 1 | 404 | 1 | 404 | Os11g0577800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001140660.1 | 0 | 27 | 465 | 27 | 461 | hypothetical protein LOC100272735 [Zea mays] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 27 | 350 | 2 | 315 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
| PDB | 3f55_C | 0 | 27 | 350 | 2 | 315 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
| PDB | 3f55_B | 0 | 27 | 350 | 2 | 315 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
| PDB | 3f55_A | 0 | 27 | 350 | 2 | 315 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
| PDB | 3em5_D | 0 | 27 | 350 | 2 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
