| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os11g43830.1 |
| Family | CE8 |
| Protein Properties | Length: 307 Molecular Weight: 33177.6 Isoelectric Point: 10.0008 |
| Chromosome | Chromosome/Scaffold: 11 Start: 26475500 End: 26478045 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 70 | 248 | 0 |
| VDPAGGGKQYRTIADALAAVPDANNTRRYVFRLKPGQVFREKVAVGEGKRYVTFESDPANPAVVVWNNTAATPGKDGKPLGAAGSAIVAIEASNFIANGV VFKNDGPTGGKQGQTVALRVAEKRASFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGRSFYDDCRIDLQARP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 307 Download |
| MATTKTQLLM KLGLLLLALA SQPSPSQQSQ AFFEIWLGQN SMQYGTPTMD TPSIAGDIVA 60 ANATAVHAAV DPAGGGKQYR TIADALAAVP DANNTRRYVF RLKPGQVFRE KVAVGEGKRY 120 VTFESDPANP AVVVWNNTAA TPGKDGKPLG AAGSAIVAIE ASNFIANGVV FKNDGPTGGK 180 QGQTVALRVA EKRASFFNCT IEGGQGVLYD EMGTHYFRNC TINGGVDAIF GFGRSFYDDC 240 RIDLQARPRR AHGASDVEEA ALAHQADQFY LERLRLSQLR HRDRWRRRQG LPRQGMGGLV 300 VRRLHL* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02432 | PLN02432 | 1.0e-31 | 75 | 242 | 168 | + putative pectinesterase | ||
| PLN02671 | PLN02671 | 1.0e-32 | 75 | 247 | 177 | + pectinesterase | ||
| PLN02665 | PLN02665 | 1.0e-32 | 75 | 237 | 166 | + pectinesterase family protein | ||
| PLN02634 | PLN02634 | 1.0e-35 | 75 | 259 | 193 | + probable pectinesterase | ||
| PLN02682 | PLN02682 | 9.0e-43 | 79 | 247 | 172 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0005623 | cell |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0009056 | catabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF22736.1 | 0 | 58 | 242 | 65 | 249 | pectinesterase family protein [Brachypodium distachyon] |
| GenBank | EAY81740.1 | 0 | 1 | 172 | 1 | 172 | hypothetical protein OsI_36913 [Oryza sativa Indica Group] |
| GenBank | EAZ19184.1 | 0 | 1 | 273 | 1 | 268 | hypothetical protein OsJ_34723 [Oryza sativa Japonica Group] |
| RefSeq | NP_001068401.1 | 0 | 1 | 306 | 1 | 306 | Os11g0659600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002451275.1 | 0 | 33 | 243 | 42 | 263 | hypothetical protein SORBIDRAFT_05g026816 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 1e-19 | 73 | 247 | 13 | 175 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 3uw0_A | 8e-18 | 62 | 258 | 27 | 226 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2nt9_B | 0.000000000000003 | 63 | 249 | 1 | 195 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2nt9_A | 0.000000000000003 | 63 | 249 | 1 | 195 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2nt6_B | 0.000000000000003 | 63 | 249 | 1 | 195 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
