| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os11g44950.2 |
| Family | GH3 |
| Protein Properties | Length: 791 Molecular Weight: 82995.3 Isoelectric Point: 8.6529 |
| Chromosome | Chromosome/Scaffold: 11 Start: 27203545 End: 27210578 |
| Description | beta-xylosidase 2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 75 | 324 | 0 |
| AGVPRLGVAGYEWWSEALHGVSDTGPGVRFGGAFPGATAFPQVIGTAASFNATLWELIGQAVSDEGRAMYNGGQAGLTFWSPNVNIFRDPRWGRGQETPG EDPAVAARYAAAYVRGLQQQQPSSGRLKLAACCKHFTAYDLDNWSGTDRFHFNAVVTRQDLEDTFNVPFRSCVVDGRAASVMCSYNQVNGVPTCADAAFL RGTIRRRWGLAGYIVSDCDSVDVFYSDQHYTRTREDAVAATLRAGLDLDC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 791 Download |
| MRRLLLLPLL VLAGAAVGGG VVPVAARSAF ACAAGGPAAT LPFCRRSLPA RARARDLVAR 60 LTRAEKVRLL VNNAAGVPRL GVAGYEWWSE ALHGVSDTGP GVRFGGAFPG ATAFPQVIGT 120 AASFNATLWE LIGQAVSDEG RAMYNGGQAG LTFWSPNVNI FRDPRWGRGQ ETPGEDPAVA 180 ARYAAAYVRG LQQQQPSSGR LKLAACCKHF TAYDLDNWSG TDRFHFNAVV TRQDLEDTFN 240 VPFRSCVVDG RAASVMCSYN QVNGVPTCAD AAFLRGTIRR RWGLAGYIVS DCDSVDVFYS 300 DQHYTRTRED AVAATLRAGL DLDCGPFLAQ YTEGAVAQGK VGDGDIDAAV TNTVTVQMRL 360 GMFDGDPAAQ PFGHLGPQHV CTAAHQELAV EAARQGIVLL KNDGRALPLS PATARRAVAV 420 VGPHAEATVA MIGNYAGKPC RYTTPLQGVA RYAARAAHQP GCTDVACAGS GQPIAAAVDA 480 ARRADATIVV AGLDQKIEAE GLDRASLLLP GRQAELISSV AKASKGPVIL VLMSGGPIDI 540 GFAQNDPKIA GILWAGYPGQ AGGQAIADVI FGHHNPGGKL PVTWYPQDYL QKVPMTNMAM 600 RANPAKGYPG RTYRFYTGPT IHPFGHGLSY TSFTHSIAHA PSQLTVRLSA HHAAASASAS 660 LNATARLSRA AAVRVAHARC EELRMPVHVD VRNVGERDGA HTVLVYAAAP ASSAAEAAAG 720 HGAPVRQLVA FEKVHVGAGG TARVEMGIDV CDGLSVADRN GVRRIPVGEH RLIIGELTHT 780 VTIALEQLGV * 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1472 | BglX | 2.0e-45 | 107 | 426 | 326 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 5.0e-52 | 65 | 356 | 296 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| pfam01915 | Glyco_hydro_3_C | 6.0e-55 | 397 | 631 | 240 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 9.0e-64 | 112 | 752 | 684 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 40 | 785 | 754 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005618 | cell wall |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016787 | hydrolase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA95273.1 | 0 | 27 | 134 | 27 | 134 | Beta-D-xylosidase, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | ABA95273.1 | 0 | 134 | 790 | 227 | 883 | Beta-D-xylosidase, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EAY81823.1 | 0 | 134 | 790 | 227 | 885 | hypothetical protein OsI_36995 [Oryza sativa Indica Group] |
| RefSeq | NP_001068441.1 | 0 | 27 | 790 | 27 | 822 | Os11g0673200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001145980.1 | 0 | 30 | 790 | 27 | 794 | hypothetical protein LOC100279508 [Zea mays] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 112 | 748 | 91 | 696 | A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase From Pyrococcus Furiosus |
| PDB | 3u48_A | 0 | 112 | 748 | 91 | 696 | A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase From Pyrococcus Furiosus |
| PDB | 3u4a_B | 0 | 112 | 748 | 91 | 696 | A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase From Pyrococcus Furiosus |
| PDB | 3u4a_A | 0 | 112 | 748 | 91 | 696 | A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase From Pyrococcus Furiosus |
| PDB | 2x41_A | 3.00004e-41 | 53 | 783 | 3 | 707 | A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase From Pyrococcus Furiosus |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
